Detailed information NTG0638461

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: SLV14_RS11170
• Genome accession: NZ_CP106840
• Coordinates: 2653169..2654398 (-)
• Length: 409 a.a.
• NCBI ID: WP_127153216.1
• Uniprot ID: -
• Organism: Streptomyces sp. Je 1-4
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2648169..2659398

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SLV14_RS11150 (SLV14_002236)	-	2648321..2648659 (-)	339	WP_018087155.1	P-II family nitrogen regulator	-
SLV14_RS11155 (SLV14_002237)	-	2648656..2649996 (-)	1341	WP_208680798.1	ammonium transporter	-
SLV14_RS11160 (SLV14_002238)	-	2650357..2651829 (-)	1473	WP_208680799.1	hypothetical protein	-
SLV14_RS11165 (SLV14_002239)	-	2652317..2652985 (+)	669	WP_208680800.1	bifunctional DNA primase/polymerase	-
SLV14_RS11170 (SLV14_002240)	pilA	2653169..2654398 (-)	1230	WP_127153216.1	signal recognition particle-docking protein FtsY	Machinery gene
SLV14_RS11175 (SLV14_002241)	-	2654544..2655767 (+)	1224	WP_208680801.1	NAD(P)/FAD-dependent oxidoreductase	-
SLV14_RS11180 (SLV14_002242)	-	2655994..2657478 (+)	1485	WP_208680802.1	purine-cytosine permease family protein	-
SLV14_RS11185 (SLV14_002243)	-	2657576..2658583 (+)	1008	WP_263269206.1	LLM class flavin-dependent oxidoreductase	-
SLV14_RS11190 (SLV14_002244)	-	2658598..2658735 (-)	138	Protein_2230	anti-sigma factor	-

Sequence

Protein

• Length: 409 a.a.
• Molecular weight: 42688.82 Da
• Isoelectric Point: 4.5652

>NTDB_id=638461 SLV14_RS11170 WP_127153216.1 2653169..2654398(-) (pilA) [Streptomyces sp. Je 1-4]
MDIVILAVVIAVVVLGAISGLVVSGRKKKQLPPSPPAAPKPSVTAPPAEPHVGEEAETPRDEERRTIEEVTLPTAEAPVA
EAPAAEPEAPAAPAIEVPEPTAGRLVRLRARLSRSQNTLGKGLLTLLSREHLDEETWEEIEDTLLTADVGVAPTQELVDR
LRERVKVLGTRTPEGLRELLREELLALIGTDADRTVHTANGIGNGGDEIPGVVMVVGVNGTGKTTTTGKLARVLVADGKS
VVLGAADTFRAAAADQLQTWGERVGARTVRGPEGGDPASIAFDAVKEGIAETADVVLIDTAGRLHTKTGLMDELGKVKRV
VEKHGPVGEVLLVLDATTGQNGLVQARVFAEVVDITGVVLTKLDGTAKGGIIVAVQRELGVPVKLIGLGEGADDLAPFEP
QAFVDALID

Nucleotide

• Length: 1230 bp

>NTDB_id=638461 SLV14_RS11170 WP_127153216.1 2653169..2654398(-) (pilA) [Streptomyces sp. Je 1-4]
ATGGACATCGTCATCCTTGCTGTAGTCATCGCCGTGGTCGTGCTCGGCGCGATCAGCGGGCTCGTCGTCAGCGGCCGCAA
GAAGAAGCAGCTGCCGCCGTCCCCGCCGGCTGCCCCGAAGCCCTCCGTTACCGCGCCCCCCGCCGAACCGCATGTCGGCG
AGGAGGCCGAGACCCCCCGCGACGAAGAGCGTCGCACCATCGAAGAAGTCACGCTGCCCACCGCCGAGGCCCCCGTGGCC
GAGGCACCGGCCGCCGAGCCCGAGGCGCCCGCCGCCCCGGCGATCGAGGTTCCCGAACCCACCGCGGGCCGGCTGGTCCG
GCTGCGCGCCCGGCTCTCCCGCTCCCAGAACACCCTGGGCAAGGGCCTGCTGACCCTGCTCTCCCGTGAACACCTCGACG
AGGAGACCTGGGAGGAGATCGAGGACACCCTGCTCACCGCCGACGTCGGCGTCGCCCCCACCCAGGAGCTGGTCGACCGG
CTGCGCGAGCGGGTCAAGGTGCTCGGCACCCGCACCCCCGAAGGCCTGCGCGAGCTGCTGCGTGAGGAGCTCCTCGCCCT
CATCGGCACGGACGCCGACCGCACCGTGCACACCGCCAACGGCATCGGCAACGGCGGCGACGAGATCCCCGGCGTCGTCA
TGGTCGTCGGCGTCAACGGCACCGGCAAGACCACCACCACCGGCAAGCTCGCCCGGGTCCTGGTCGCCGACGGCAAGTCC
GTGGTCCTCGGCGCCGCCGACACCTTCCGCGCCGCGGCCGCCGACCAGCTCCAGACCTGGGGCGAGCGGGTCGGTGCCCG
TACGGTCCGCGGACCCGAGGGCGGCGACCCCGCCTCCATCGCCTTCGACGCGGTGAAGGAAGGCATCGCCGAGACCGCCG
ATGTCGTCCTGATCGACACCGCGGGCCGGCTGCACACCAAGACCGGACTGATGGACGAGCTCGGCAAGGTCAAGCGGGTC
GTCGAGAAGCACGGCCCGGTGGGCGAGGTGCTGCTCGTCCTGGACGCCACCACCGGCCAGAACGGCCTGGTCCAGGCCCG
GGTGTTCGCCGAGGTCGTGGACATCACCGGAGTGGTGCTCACCAAGCTCGACGGCACCGCCAAGGGCGGCATCATCGTCG
CCGTCCAGCGTGAGCTCGGGGTCCCCGTCAAGCTCATCGGCCTGGGCGAGGGGGCGGACGACCTGGCGCCCTTCGAGCCG
CAGGCCTTCGTCGACGCCCTGATCGACTGA

Domains

Predicted by InterProScan.

• SRP54-type protein, GTPase domain (SRP54) (211-408)

• SRP54-type protein, helical bundle domain (SRP54_N) (119-184)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	41.551	88.264	0.367