Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   LU294_RS06505 Genome accession   NZ_CP089743
Coordinates   1237071..1237865 (+) Length   264 a.a.
NCBI ID   WP_014297988.1    Uniprot ID   A0A1J9YJW5
Organism   Bacillus paranthracis strain SHOU-BC01     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 1232071..1242865
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LU294_RS06490 (LU294_06490) argR 1232911..1233360 (+) 450 WP_001032581.1 arginine repressor ArgR -
  LU294_RS06495 (LU294_06495) recN 1233627..1235366 (+) 1740 WP_000947749.1 DNA repair protein RecN Machinery gene
  LU294_RS06500 (LU294_06500) spoIVB 1235485..1236783 (+) 1299 WP_109630145.1 SpoIVB peptidase -
  LU294_RS06505 (LU294_06505) spo0A 1237071..1237865 (+) 795 WP_014297988.1 sporulation transcription factor Spo0A Regulator
  LU294_RS06510 (LU294_06510) - 1238019..1238993 (+) 975 WP_232685414.1 tyrosine-type recombinase/integrase -
  LU294_RS06515 (LU294_06515) - 1239768..1240583 (+) 816 WP_097882107.1 abortive infection family protein -
  LU294_RS06520 (LU294_06520) - 1240602..1241249 (+) 648 WP_097882104.1 hypothetical protein -
  LU294_RS06525 (LU294_06525) - 1242411..1242710 (+) 300 WP_232685415.1 hypothetical protein -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29454.20 Da        Isoelectric Point: 7.4719

>NTDB_id=638437 LU294_RS06505 WP_014297988.1 1237071..1237865(+) (spo0A) [Bacillus paranthracis strain SHOU-BC01]
MEKIKVCLVDDNKELVSMLESYVAAQEDMEVIGTAYNGQECLNLLKDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=638437 LU294_RS06505 WP_014297988.1 1237071..1237865(+) (spo0A) [Bacillus paranthracis strain SHOU-BC01]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
GGATATGGAAGTAATTGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAAAGATAAGCAGCCGGATGTACTTG
TATTAGATATTATTATGCCACATTTAGATGGGTTAGCTGTACTAGAGAAAATGCGCCATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTGACAGCGTTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCGTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGCGGTAAAGCGAACGCTACTATTAAACGTCCAC
TGCCATCTTTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAACTTAGATGCAAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGGTACATGTACTTAAGGGAAGCAATTTCTATGGTGTACAATGACATCGAATTACT
GGGATCTATTACGAAAGTATTGTATCCAGATATCGCGAAGAAATATAATACAACAGCAAGTCGTGTCGAGCGTGCAATCC
GTCACGCAATTGAAGTAGCATGGAGTCGTGGGAATATCGATTCTATTTCGTCCTTATTCGGTTATACAGTATCTATGTCA
AAAGCAAAACCTACGAACTCTGAGTTCATCGCAATGGTTGCGGATAAGTTGAGACTTGAACATAAGGCTTCGTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1J9YJW5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

81.273

100

0.822