Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   LUV29_RS07750 Genome accession   NZ_CP089592
Coordinates   1479159..1479623 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain Bsi     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1474159..1484623
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LUV29_RS07730 (LUV29_07730) kinA 1474625..1476445 (+) 1821 WP_003245779.1 sporulation histidine kinase KinA -
  LUV29_RS07735 (LUV29_07735) dapX 1476456..1477637 (-) 1182 WP_003232415.1 aminotransferase A -
  LUV29_RS07740 (LUV29_07740) - 1477839..1478000 (-) 162 WP_003245246.1 hypothetical protein -
  LUV29_RS07745 (LUV29_07745) cheV 1478204..1479115 (+) 912 WP_009967126.1 chemotaxis protein CheV -
  LUV29_RS07750 (LUV29_07750) kre 1479159..1479623 (-) 465 WP_003232406.1 YkyB family protein Regulator
  LUV29_RS07755 (LUV29_07755) ykuC 1479749..1481041 (-) 1293 WP_003245267.1 MFS transporter -
  LUV29_RS07760 (LUV29_07760) ltdD 1481117..1481611 (-) 495 WP_010886500.1 L,D-transpeptidase family protein -
  LUV29_RS07765 (LUV29_07765) ppeE 1481668..1482528 (-) 861 WP_003232400.1 metallophosphoesterase -
  LUV29_RS07770 (LUV29_07770) fadH 1482671..1483435 (+) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=638212 LUV29_RS07750 WP_003232406.1 1479159..1479623(-) (kre) [Bacillus subtilis strain Bsi]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=638212 LUV29_RS07750 WP_003232406.1 1479159..1479623(-) (kre) [Bacillus subtilis strain Bsi]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTATCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1