Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   LUS72_RS19795 Genome accession   NZ_CP089518
Coordinates   3832268..3832726 (+) Length   152 a.a.
NCBI ID   WP_000804854.1    Uniprot ID   A0A2B8TGS8
Organism   Bacillus cereus strain PT1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3827268..3837726
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LUS72_RS19780 - 3827933..3828169 (+) 237 WP_000283735.1 hypothetical protein -
  LUS72_RS19785 - 3828335..3830443 (-) 2109 WP_097830863.1 polyphosphate kinase -
  LUS72_RS19790 - 3830552..3832126 (-) 1575 WP_141533249.1 Ppx/GppA family phosphatase -
  LUS72_RS19795 kre 3832268..3832726 (+) 459 WP_000804854.1 YkyB family protein Regulator
  LUS72_RS19800 - 3832758..3833420 (-) 663 WP_097830861.1 YkyA family protein -
  LUS72_RS19805 - 3833973..3834604 (-) 632 Protein_3845 diguanylate cyclase domain-containing protein -
  LUS72_RS19810 - 3834768..3835001 (+) 234 WP_097830860.1 phage holin -
  LUS72_RS19815 - 3835033..3835533 (-) 501 WP_097830859.1 hypothetical protein -
  LUS72_RS19820 - 3835957..3837498 (+) 1542 WP_264448116.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17784.47 Da        Isoelectric Point: 10.6793

>NTDB_id=637887 LUS72_RS19795 WP_000804854.1 3832268..3832726(+) (kre) [Bacillus cereus strain PT1]
MKPSQPQSQLHNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLITEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKDDFRTLPHLGHLESSYRNPKTTLSLTIAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=637887 LUS72_RS19795 WP_000804854.1 3832268..3832726(+) (kre) [Bacillus cereus strain PT1]
ATGAAACCTTCACAACCACAATCTCAATTACATAACCAACATTCTATTAATAGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCTGCAACTAACCCTAAGTACTTATACTGGTTAAAAAAGACTGCTTTAGAACGCTTAATTACTGAAA
AGAAGGCTATCAAAGAAGGATTACATTTTTCTAGAAATCCACGTTTTAGTCAACAACAATCCGATGTTCTTATACGTTTA
GGTGATTATTTTTTCCATATCCCTCCTACGAAAGATGATTTTCGCACCCTACCGCATCTTGGTCACCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAATAGCAAAAAAAACACTGCAAGATTATATTGGTCCTGAAGCATTAAAAC
AAGAAAAAAAATTAAGCGAACCAGTTCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2B8TGS8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

63.793

76.316

0.487