Detailed information    

insolico Bioinformatically predicted

Overview

Name   recU   Type   Machinery gene
Locus tag   LUS72_RS07820 Genome accession   NZ_CP089518
Coordinates   1510378..1510980 (-) Length   200 a.a.
NCBI ID   WP_071770132.1    Uniprot ID   A0A2A8U805
Organism   Bacillus cereus strain PT1     
Function   plasmid transformation; homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1505378..1515980
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LUS72_RS07800 dnaD 1505681..1506388 (+) 708 WP_000728545.1 DNA replication protein DnaD -
  LUS72_RS07805 nth 1506404..1507051 (+) 648 WP_264448746.1 endonuclease III -
  LUS72_RS07810 - 1507055..1507573 (+) 519 WP_097831704.1 YpoC family protein -
  LUS72_RS07815 - 1507597..1510311 (-) 2715 WP_264448747.1 penicillin-binding protein 1A -
  LUS72_RS07820 recU 1510378..1510980 (-) 603 WP_071770132.1 Holliday junction resolvase RecU Machinery gene
  LUS72_RS07825 - 1511083..1512108 (+) 1026 WP_097831702.1 DUF2515 domain-containing protein -
  LUS72_RS27240 - 1512453..1512632 (-) 180 WP_097831701.1 phage portal protein -
  LUS72_RS07830 - 1512718..1512960 (+) 243 WP_001252038.1 hypothetical protein -
  LUS72_RS07835 - 1512976..1513320 (+) 345 WP_097831700.1 YppE family protein -
  LUS72_RS07840 - 1513347..1513538 (-) 192 WP_000242654.1 YppF family protein -
  LUS72_RS07845 - 1513716..1514318 (+) 603 WP_264448752.1 YppG family protein -
  LUS72_RS07850 - 1514473..1514886 (+) 414 WP_097831698.1 CotD family spore coat protein -
  LUS72_RS07855 - 1514943..1515497 (+) 555 WP_097831697.1 DUF1273 domain-containing protein -
  LUS72_RS07860 gpsB 1515595..1515930 (+) 336 WP_000622426.1 cell division regulator GpsB -

Sequence

Protein


Download         Length: 200 a.a.        Molecular weight: 23375.64 Da        Isoelectric Point: 9.5601

>NTDB_id=637877 LUS72_RS07820 WP_071770132.1 1510378..1510980(-) (recU) [Bacillus cereus strain PT1]
MTIRYPNGKRYDQASQPHKTPIKKHTYSNRGMSLEEELNETNQYYLTHNIACVHKKPTPLQIVKVDYPARSAAVVKEAYF
KQPSTTDYNGVYKGKYIDFEAKETKNKTSFPLQNFHLHQIEHMKQVIAHNGIAFVIIKFTLFDEFYLLDAKHIIAFWNRQ
NTGGRKSITKQEIEEHGSLLSCGYHPRIDYIRVLDTVYFS

Nucleotide


Download         Length: 603 bp        

>NTDB_id=637877 LUS72_RS07820 WP_071770132.1 1510378..1510980(-) (recU) [Bacillus cereus strain PT1]
ATGACCATTCGTTACCCAAATGGAAAAAGGTACGATCAAGCTTCACAACCTCATAAAACACCAATAAAAAAACATACTTA
CAGTAATAGAGGTATGTCCCTTGAAGAGGAATTGAATGAAACCAATCAATATTACTTAACCCATAATATTGCATGCGTAC
ATAAAAAACCTACACCTCTTCAAATTGTAAAAGTAGATTACCCCGCTCGAAGTGCTGCAGTGGTAAAAGAAGCGTATTTC
AAACAACCTTCTACAACAGATTACAACGGTGTATACAAAGGGAAATACATCGATTTTGAAGCAAAAGAAACAAAAAACAA
AACCAGTTTTCCACTTCAAAACTTCCACCTTCATCAAATTGAGCATATGAAGCAAGTAATCGCTCATAATGGAATTGCAT
TTGTTATTATTAAATTTACACTTTTTGATGAATTTTATTTATTAGATGCAAAACATATTATTGCATTTTGGAATCGTCAA
AATACTGGTGGACGTAAATCGATTACAAAACAAGAAATAGAAGAGCATGGATCTTTATTATCATGCGGTTATCACCCTCG
AATTGATTATATCCGCGTACTAGACACGGTTTATTTTTCGTGA

Domains

Predicted by InterproScan.

Recombination protein U (RecU)

(30-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2A8U805

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recU Bacillus subtilis subsp. subtilis str. 168

63

100

0.63