Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   LUS72_RS05950 Genome accession   NZ_CP089518
Coordinates   1161074..1161250 (+) Length   58 a.a.
NCBI ID   WP_001003336.1    Uniprot ID   A0A2C1SQH3
Organism   Bacillus cereus strain PT1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1156074..1166250
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LUS72_RS05930 clpB 1156395..1158995 (+) 2601 WP_097830024.1 ATP-dependent chaperone ClpB -
  LUS72_RS05935 - 1159035..1159217 (-) 183 WP_001211113.1 YjzD family protein -
  LUS72_RS05940 - 1159374..1160108 (+) 735 WP_097830025.1 alpha/beta hydrolase -
  LUS72_RS05945 - 1160138..1161010 (+) 873 WP_141533311.1 NAD-dependent epimerase/dehydratase family protein -
  LUS72_RS05950 comZ 1161074..1161250 (+) 177 WP_001003336.1 ComZ family protein Regulator
  LUS72_RS05955 fabH 1161653..1162585 (+) 933 WP_001100550.1 beta-ketoacyl-ACP synthase III -
  LUS72_RS05960 fabF 1162617..1163855 (+) 1239 WP_071744630.1 beta-ketoacyl-ACP synthase II -
  LUS72_RS05965 - 1163961..1164752 (+) 792 WP_097830026.1 DUF2268 domain-containing protein -
  LUS72_RS05970 - 1164896..1165642 (+) 747 WP_000966130.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6549.71 Da        Isoelectric Point: 4.4797

>NTDB_id=637870 LUS72_RS05950 WP_001003336.1 1161074..1161250(+) (comZ) [Bacillus cereus strain PT1]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMSEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=637870 LUS72_RS05950 WP_001003336.1 1161074..1161250(+) (comZ) [Bacillus cereus strain PT1]
ATGAACGAAAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCTAAGGCAATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAAGCACAGCCTGTGTTAGAGCTATTGATGAAAGTAATGAGCGAAGCATATGAGCTTGGGA
AAGCTGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2C1SQH3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586