Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   LUY91_RS14840 Genome accession   NZ_CP089495
Coordinates   2940790..2941506 (-) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain E1202_II_ST496     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2935790..2946506
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LUY91_RS14820 - 2936884..2937834 (+) 951 WP_407535432.1 LacI family DNA-binding transcriptional regulator -
  LUY91_RS14825 - 2937983..2939467 (+) 1485 WP_000141417.1 sucrose-6-phosphate hydrolase -
  LUY91_RS14830 - 2939464..2940423 (+) 960 WP_001253312.1 carbohydrate kinase -
  LUY91_RS14835 - 2940611..2940718 (-) 108 WP_001790167.1 hypothetical protein -
  LUY91_RS14840 agrA 2940790..2941506 (-) 717 WP_000688492.1 quorum-sensing response regulator AgrA Regulator
  LUY91_RS14845 agrC 2941525..2942817 (-) 1293 WP_001554031.1 quorum-sensing sensor histidine kinase AgrC -
  LUY91_RS14850 agrD 2942842..2942982 (-) 141 WP_001093929.1 cyclic lactone autoinducer peptide AgrD -
  LUY91_RS14855 agrB 2942979..2943548 (-) 570 WP_001105707.1 accessory gene regulator AgrB -
  LUY91_RS14860 hld 2943838..2943918 (+) 81 WP_000046022.1 delta-hemolysin -
  LUY91_RS14865 - 2944515..2945300 (-) 786 WP_000867960.1 carbon-nitrogen family hydrolase -
  LUY91_RS14870 - 2945652..2946278 (-) 627 WP_000522384.1 nitroreductase family protein -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=637542 LUY91_RS14840 WP_000688492.1 2940790..2941506(-) (agrA) [Staphylococcus aureus strain E1202_II_ST496]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=637542 LUY91_RS14840 WP_000688492.1 2940790..2941506(-) (agrA) [Staphylococcus aureus strain E1202_II_ST496]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACCTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCTGAATTAAGAACTCGAATTATAGACTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1