Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   LLE29_RS05650 Genome accession   NZ_CP106780
Coordinates   1080430..1080891 (+) Length   153 a.a.
NCBI ID   WP_003688187.1    Uniprot ID   Q5F7W3
Organism   Neisseria gonorrhoeae strain 10794     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1075430..1085891
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LLE29_RS05615 (LLE29_05615) - 1075463..1076677 (-) 1215 WP_003690983.1 pyridoxal phosphate-dependent aminotransferase -
  LLE29_RS05620 (LLE29_05620) - 1076766..1076975 (-) 210 WP_003688192.1 4-oxalocrotonate tautomerase family protein -
  LLE29_RS05625 (LLE29_05625) - 1077167..1077973 (+) 807 WP_003688191.1 DUF4198 domain-containing protein -
  LLE29_RS11950 - 1078033..1079252 (-) 1220 Protein_1099 Glu/Leu/Phe/Val dehydrogenase -
  LLE29_RS05645 (LLE29_05645) - 1079647..1080357 (+) 711 WP_003690977.1 phosphoglycolate phosphatase -
  LLE29_RS05650 (LLE29_05650) recX 1080430..1080891 (+) 462 WP_003688187.1 recombination regulator RecX Regulator
  LLE29_RS05655 (LLE29_05655) - 1080965..1081126 (+) 162 WP_010358395.1 hypothetical protein -
  LLE29_RS05660 (LLE29_05660) - 1081279..1081761 (+) 483 WP_003688183.1 acyl-CoA thioesterase -
  LLE29_RS05665 (LLE29_05665) - 1082159..1083172 (-) 1014 WP_025456184.1 peptidoglycan DD-metalloendopeptidase family protein -
  LLE29_RS05670 (LLE29_05670) surE 1083274..1084020 (-) 747 WP_003690973.1 5'/3'-nucleotidase SurE -
  LLE29_RS05675 (LLE29_05675) - 1084037..1085593 (-) 1557 WP_134994006.1 TerC family protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17745.13 Da        Isoelectric Point: 10.4361

>NTDB_id=637014 LLE29_RS05650 WP_003688187.1 1080430..1080891(+) (recX) [Neisseria gonorrhoeae strain 10794]
MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEKTSRNLLPDRSSEKQAAIAVLRKKFKHPAANLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDSC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=637014 LLE29_RS05650 WP_003688187.1 1080430..1080891(+) (recX) [Neisseria gonorrhoeae strain 10794]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAAGTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGCACGCCGAAAGCGAAGAGGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTACGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTCATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGATGAAAAAACCAGCCGCAACCTGCTTCCCGACCGCTCAAGCGAAAAGCAAGCCGCCATAGCCGTGTTGCG
TAAAAAATTCAAACACCCCGCCGCCAACCTCAAAGAAAAACAAAAACAGGCGCGTTTCCTCGCCTATCGCGGTTTTGATG
CCGATACCGTTCAGACGGCATTGAAACACGCTTGGGACGAAAATTGGGAAGACAGCTGCTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5F7W3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

100

100

1