Detailed information
Bioinformatically predicted
Overview
| Name | comEC/comE3 | Type | Machinery gene |
| Locus tag | U063_RS00340 | Genome accession | NC_022886 |
| Coordinates | 63049..64362 (-) | Length | 437 a.a. |
| NCBI ID | WP_023591519.1 | Uniprot ID | V5NKV0 |
| Organism | Helicobacter pylori BM012A | ||
| Function | ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 58049..69362
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U063_RS00310 (U063_0063) | nadC | 58512..59333 (-) | 822 | WP_023591514.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| U063_RS00315 (U063_0064) | nadA | 59333..60343 (-) | 1011 | WP_023591515.1 | quinolinate synthase NadA | - |
| U063_RS00320 (U063_0065) | - | 60333..61136 (-) | 804 | WP_023591516.1 | phosphatidylserine decarboxylase | - |
| U063_RS00325 (U063_0066) | - | 61130..61636 (-) | 507 | WP_000953105.1 | DUF6115 domain-containing protein | - |
| U063_RS00330 (U063_0067) | - | 61649..62143 (-) | 495 | WP_049820994.1 | hypothetical protein | - |
| U063_RS00335 (U063_0068) | mqnP | 62136..62978 (-) | 843 | WP_236620126.1 | menaquinone biosynthesis prenyltransferase MqnP | - |
| U063_RS00340 (U063_0069) | comEC/comE3 | 63049..64362 (-) | 1314 | WP_023591519.1 | ComEC/Rec2 family competence protein | Machinery gene |
| U063_RS00345 (U063_0070) | - | 64359..65819 (-) | 1461 | WP_023591520.1 | replicative DNA helicase | - |
| U063_RS00350 (U063_0071) | - | 65830..67230 (-) | 1401 | WP_023591521.1 | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | - |
| U063_RS00355 (U063_0072) | crdS | 67233..68435 (-) | 1203 | WP_080261034.1 | copper-sensing histidine kinase CrdS | - |
| U063_RS00360 (U063_0073) | crdR | 68401..69042 (-) | 642 | WP_023591523.1 | copper response regulator transcription factor CrdR | - |
Sequence
Protein
Download Length: 437 a.a. Molecular weight: 50274.26 Da Isoelectric Point: 9.9286
>NTDB_id=63693 U063_RS00340 WP_023591519.1 63049..64362(-) (comEC/comE3) [Helicobacter pylori BM012A]
MKDKTFQGAFELLATPKEYLWCGIVLSLLLAINLYLEYLNHQKLDFSKPTSLNAQILLQYPKTKDQKTYFVLKLQSKGMI
FYTTIKEPLKNLQYRHAQFFGKFKPCSFLESLKSCFFQTYSFSLTRKHNFKSHWRHFIDSAHSSALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSVSVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRLLSFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQAFFKTSSFLMRSLQAISLS
ALVFLNMLIVAHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAMGLGSLLDHFLSMPLTIPTISVFSPLWLLGVHLFLT
ILSARFFKVYLSMNVLSAGFFLYCCYQYIIMPSLIVG
MKDKTFQGAFELLATPKEYLWCGIVLSLLLAINLYLEYLNHQKLDFSKPTSLNAQILLQYPKTKDQKTYFVLKLQSKGMI
FYTTIKEPLKNLQYRHAQFFGKFKPCSFLESLKSCFFQTYSFSLTRKHNFKSHWRHFIDSAHSSALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSVSVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRLLSFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQAFFKTSSFLMRSLQAISLS
ALVFLNMLIVAHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAMGLGSLLDHFLSMPLTIPTISVFSPLWLLGVHLFLT
ILSARFFKVYLSMNVLSAGFFLYCCYQYIIMPSLIVG
Nucleotide
Download Length: 1314 bp
>NTDB_id=63693 U063_RS00340 WP_023591519.1 63049..64362(-) (comEC/comE3) [Helicobacter pylori BM012A]
TTGAAAGATAAAACTTTTCAGGGGGCGTTTGAACTTCTTGCAACCCCCAAAGAATACTTATGGTGTGGGATTGTTTTAAG
CCTTTTGTTGGCAATCAATCTTTATTTAGAATACTTGAATCACCAAAAGCTTGATTTTTCAAAACCTACAAGCCTGAACG
CTCAAATCTTGTTGCAATACCCTAAAACTAAAGATCAAAAAACCTATTTTGTTTTAAAGCTCCAATCAAAGGGCATGATC
TTTTACACCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCCACGCGCAATTTTTTGGCAAGTTCAAACCCTGCTC
GTTTTTGGAGTCTCTAAAATCATGCTTTTTTCAAACTTACTCTTTTTCTTTAACACGAAAACACAATTTCAAATCGCATT
GGCGCCATTTCATTGACAGCGCTCATTCAAGCGCTTTAGTGGGGAATTTATACCGCGCGTTATTTATAGGGGATAGCTTG
AATAAAGACTTAAGAGATAGGGCTAACGCGCTAGGGATCAACCACTTACTAGCCATTAGCGGGTTCCATTTAGGGATTTT
GAGCGTTAGCGTGTATTTTCTTTTTTCGCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTATAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTGGGGTATTTATTGCTACTAGATTTTTTACCCTCTTTTTTCAGGGCA
TTTTTAATGGGCTTATTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGCTTTTGAGTTTTAAACTTTTGATTTTAGCGTG
CTGTATCGCCATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTTTGTGGGGTGTGGTATATCT
TTTTATTCTTAAAACACACTCAAGCCTTTTTTAAAACCTCTTCTTTTTTGATGCGATCTCTTCAAGCCATAAGCTTAAGT
GCGCTGGTGTTTTTGAACATGCTCATTGTTGCGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAGCTCTTTAGCATTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTGTTTTTGCATGCGATGGGTTTGGGGTCTTTGTTGGATCATT
TTTTAAGCATGCCTTTAACAATCCCTACGATTTCGGTTTTTTCGCCTTTATGGCTTTTGGGGGTGCATTTATTTTTAACG
ATTTTAAGCGCGCGTTTTTTTAAGGTTTATTTAAGCATGAATGTTTTAAGCGCGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGCTTAATTGTAGGTTAG
TTGAAAGATAAAACTTTTCAGGGGGCGTTTGAACTTCTTGCAACCCCCAAAGAATACTTATGGTGTGGGATTGTTTTAAG
CCTTTTGTTGGCAATCAATCTTTATTTAGAATACTTGAATCACCAAAAGCTTGATTTTTCAAAACCTACAAGCCTGAACG
CTCAAATCTTGTTGCAATACCCTAAAACTAAAGATCAAAAAACCTATTTTGTTTTAAAGCTCCAATCAAAGGGCATGATC
TTTTACACCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCCACGCGCAATTTTTTGGCAAGTTCAAACCCTGCTC
GTTTTTGGAGTCTCTAAAATCATGCTTTTTTCAAACTTACTCTTTTTCTTTAACACGAAAACACAATTTCAAATCGCATT
GGCGCCATTTCATTGACAGCGCTCATTCAAGCGCTTTAGTGGGGAATTTATACCGCGCGTTATTTATAGGGGATAGCTTG
AATAAAGACTTAAGAGATAGGGCTAACGCGCTAGGGATCAACCACTTACTAGCCATTAGCGGGTTCCATTTAGGGATTTT
GAGCGTTAGCGTGTATTTTCTTTTTTCGCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTATAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTGGGGTATTTATTGCTACTAGATTTTTTACCCTCTTTTTTCAGGGCA
TTTTTAATGGGCTTATTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGCTTTTGAGTTTTAAACTTTTGATTTTAGCGTG
CTGTATCGCCATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTTTGTGGGGTGTGGTATATCT
TTTTATTCTTAAAACACACTCAAGCCTTTTTTAAAACCTCTTCTTTTTTGATGCGATCTCTTCAAGCCATAAGCTTAAGT
GCGCTGGTGTTTTTGAACATGCTCATTGTTGCGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAGCTCTTTAGCATTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTGTTTTTGCATGCGATGGGTTTGGGGTCTTTGTTGGATCATT
TTTTAAGCATGCCTTTAACAATCCCTACGATTTCGGTTTTTTCGCCTTTATGGCTTTTGGGGGTGCATTTATTTTTAACG
ATTTTAAGCGCGCGTTTTTTTAAGGTTTATTTAAGCATGAATGTTTTAAGCGCGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGCTTAATTGTAGGTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEC/comE3 | Helicobacter pylori 26695 |
95.195 |
100 |
0.952 |