Detailed information NTG0063683

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: F6Y17_RS06915
• Genome accession: NZ_AP020320
• Coordinates: 1324718..1325800 (-)
• Length: 360 a.a.
• NCBI ID: WP_001557172.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain KUH180062
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1319718..1330800

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F6Y17_RS06895	-	1320327..1320431 (-)	105	WP_001790092.1	hypothetical protein	-
F6Y17_RS06900 (KUH180062_1291)	secA	1320473..1323004 (-)	2532	WP_000506531.1	preprotein translocase subunit SecA	-
F6Y17_RS06905 (KUH180062_1292)	hpf	1323418..1323990 (-)	573	WP_000617735.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
F6Y17_RS06910 (KUH180062_1293)	-	1324051..1324725 (-)	675	WP_001057965.1	ComF family protein	-
F6Y17_RS06915 (KUH180062_1294)	comFA	1324718..1325800 (-)	1083	WP_001557172.1	DEAD/DEAH box helicase	Machinery gene
F6Y17_RS06920 (KUH180062_1295)	fakB1	1326164..1327030 (-)	867	WP_000686347.1	fatty acid kinase binding subunit FakB1	-
F6Y17_RS06925 (KUH180062_1296)	-	1327174..1327815 (+)	642	WP_000192949.1	YigZ family protein	-
F6Y17_RS06930 (KUH180062_1297)	-	1327980..1329035 (-)	1056	WP_000258150.1	glycosyltransferase family 4 protein	-
F6Y17_RS06935 (KUH180062_1298)	gdpS	1329353..1330423 (+)	1071	WP_000460983.1	GGDEF domain-containing protein GdpS	-

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 42017.47 Da
• Isoelectric Point: 9.6864

>NTDB_id=63683 F6Y17_RS06915 WP_001557172.1 1324718..1325800(-) (comFA) [Staphylococcus aureus strain KUH180062]
MDNVTRYKITESSQSSSQAYYHLSFELSEQQSYASEHIVRAIRMRQTILLYAVTGAGKTEMMFQGIQYARRQGDNIAIVS
PRVDVVVEISKRIKDAFLNEDIDILHQQSSQQFEGHFVVCTVHQLYRFKQHFDTIFIDEVDAFPLSMDKSLQQALKSSSK
VEHATIYMTATPPKQLLSEIPHENIIKLPARFHKKSLPVPKYRYFKLNNNKIQKMLYRILQDQINNQRYTLVFFNNIETM
IKTFSVYKQKITKLTYVHSEDVFRFEKVEQLRNGHFDVIFTTTILERGFTMANLDVVVIDAHQYTQEALIQIAGRVGRKL
ECPAGKVLFFHEGVSMNMIQAKKEIQRMNKLALKRGWIDE

Nucleotide

• Length: 1083 bp

>NTDB_id=63683 F6Y17_RS06915 WP_001557172.1 1324718..1325800(-) (comFA) [Staphylococcus aureus strain KUH180062]
ATGGATAATGTAACAAGATATAAAATAACAGAGAGTTCGCAAAGTTCATCACAAGCATATTATCATCTCTCATTTGAATT
GTCGGAACAGCAGTCTTATGCCTCAGAACATATTGTTCGAGCCATTAGAATGAGACAAACGATTTTGTTATATGCCGTAA
CAGGTGCAGGTAAGACAGAAATGATGTTTCAAGGCATTCAATATGCAAGACGACAGGGAGATAATATAGCTATTGTGTCA
CCGCGTGTAGATGTTGTTGTAGAAATTAGTAAACGTATTAAAGACGCATTTCTTAATGAAGATATAGACATACTACACCA
GCAATCAAGTCAACAATTTGAAGGGCATTTTGTTGTATGCACAGTACATCAACTTTACCGATTCAAACAGCACTTTGATA
CTATTTTTATTGATGAAGTCGATGCCTTTCCTTTATCAATGGATAAAAGTTTACAACAAGCATTGAAGTCATCTTCTAAA
GTTGAACATGCAACGATTTATATGACAGCAACACCACCGAAACAACTTCTGTCAGAGATTCCCCACGAAAATATAATTAA
ATTGCCAGCTCGCTTTCATAAAAAATCACTTCCAGTTCCTAAATATCGTTATTTCAAACTTAATAATAATAAGATTCAGA
AAATGTTATACCGAATTTTACAAGATCAAATTAATAATCAACGTTATACACTGGTGTTTTTTAACAATATAGAAACAATG
ATTAAAACATTTTCGGTTTATAAGCAGAAAATTACTAAATTAACATACGTCCATAGCGAGGATGTTTTTCGCTTTGAAAA
AGTTGAACAATTAAGGAATGGACATTTCGATGTCATTTTTACTACGACAATATTAGAACGTGGATTTACAATGGCAAATT
TGGATGTTGTTGTTATCGATGCACATCAATATACTCAAGAGGCTTTAATACAAATTGCTGGACGTGTTGGACGAAAATTA
GAATGTCCTGCTGGAAAAGTATTGTTTTTTCATGAAGGAGTAAGTATGAATATGATTCAAGCTAAAAAAGAGATTCAAAG
GATGAACAAATTAGCATTAAAAAGAGGTTGGATTGATGAATAA

Domains

Predicted by InterProScan.

• Type III restriction enzyme, res subunit (ResIII) (25-173)

• Helicase conserved C-terminal domain (Helicase_C) (215-318)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	38.938	94.167	0.367