Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   LUX28_RS06105 Genome accession   NZ_CP089310
Coordinates   1183361..1184017 (+) Length   218 a.a.
NCBI ID   WP_003155032.1    Uniprot ID   I2C3J8
Organism   Bacillus velezensis strain A4P130     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1178361..1189017
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LUX28_RS06075 (LUX28_06075) oppF 1178892..1179809 (+) 918 WP_012117283.1 oligopeptide ABC transporter ATP-binding protein OppF -
  LUX28_RS06080 (LUX28_06080) - 1179916..1181103 (+) 1188 WP_040238278.1 putative glycoside hydrolase -
  LUX28_RS06085 (LUX28_06085) - 1181221..1181799 (+) 579 WP_007409110.1 GNAT family N-acetyltransferase -
  LUX28_RS06090 (LUX28_06090) spx 1181977..1182372 (+) 396 WP_003155034.1 transcriptional regulator Spx -
  LUX28_RS06095 (LUX28_06095) - 1182429..1183085 (-) 657 WP_007409109.1 TerC family protein -
  LUX28_RS06105 (LUX28_06105) mecA 1183361..1184017 (+) 657 WP_003155032.1 adaptor protein MecA Regulator
  LUX28_RS06110 (LUX28_06110) - 1184168..1185328 (+) 1161 WP_053573556.1 competence protein CoiA family protein -
  LUX28_RS06115 (LUX28_06115) pepF 1185556..1187385 (+) 1830 WP_108702427.1 oligoendopeptidase F Regulator
  LUX28_RS06120 (LUX28_06120) - 1187423..1187590 (-) 168 WP_003155026.1 hypothetical protein -
  LUX28_RS06125 (LUX28_06125) spxH 1187877..1188779 (-) 903 WP_003155024.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25964.75 Da        Isoelectric Point: 4.1143

>NTDB_id=636387 LUX28_RS06105 WP_003155032.1 1183361..1184017(+) (mecA) [Bacillus velezensis strain A4P130]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAESREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAHESSVSIHRLEEYGKLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=636387 LUX28_RS06105 WP_003155032.1 1183361..1184017(+) (mecA) [Bacillus velezensis strain A4P130]
ATGGAAATAGAAAGAATTAATGAGCATACTGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAGGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTTT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAGCCGGGAAGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ATGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATTAAAACGACCCTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
CGAATCATCAGTCAGCATTCACCGTCTTGAAGAATACGGCAAATTGGTGATCGCTGATCATGCGTTATATACAATAAAAA
AACACTTTGCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C3J8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

89.45

100

0.895