Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   LT232_RS07275 Genome accession   NZ_CP089287
Coordinates   1539069..1539260 (-) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain GSBZ09     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1534069..1544260
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LT232_RS07250 (LT232_07250) - 1534427..1535413 (-) 987 WP_012117279.1 ABC transporter ATP-binding protein -
  LT232_RS07255 (LT232_07255) - 1535587..1536372 (-) 786 WP_012117278.1 DUF2268 domain-containing protein -
  LT232_RS07260 (LT232_07260) fabF 1536456..1537694 (-) 1239 WP_012117277.1 beta-ketoacyl-ACP synthase II -
  LT232_RS07265 (LT232_07265) - 1537717..1538655 (-) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  LT232_RS07270 (LT232_07270) - 1538822..1539040 (+) 219 WP_007409123.1 hypothetical protein -
  LT232_RS07275 (LT232_07275) comZ 1539069..1539260 (-) 192 WP_003155061.1 ComZ family protein Regulator
  LT232_RS07280 (LT232_07280) med 1539273..1540226 (-) 954 WP_007409125.1 BMP family ABC transporter substrate-binding protein Regulator
  LT232_RS07285 (LT232_07285) - 1540316..1540882 (-) 567 WP_007409126.1 hypothetical protein -
  LT232_RS07290 (LT232_07290) - 1540965..1541699 (-) 735 WP_080130436.1 hypothetical protein -
  LT232_RS07295 (LT232_07295) - 1541960..1542145 (+) 186 WP_007409129.1 YjzD family protein -
  LT232_RS07300 (LT232_07300) - 1542182..1542361 (-) 180 WP_003155070.1 YjzC family protein -
  LT232_RS07305 (LT232_07305) argF 1542437..1543408 (-) 972 WP_094031642.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=636153 LT232_RS07275 WP_003155061.1 1539069..1539260(-) (comZ) [Bacillus velezensis strain GSBZ09]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=636153 LT232_RS07275 WP_003155061.1 1539069..1539260(-) (comZ) [Bacillus velezensis strain GSBZ09]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794