Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   YBT1518_RS07185 Genome accession   NC_022873
Coordinates   1412603..1412779 (+) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus thuringiensis YBT-1518     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1407603..1417779
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  YBT1518_RS07165 (YBT1518_06895) clpC 1407934..1410534 (+) 2601 WP_000365411.1 ATP-dependent chaperone ClpB Regulator
  YBT1518_RS07170 (YBT1518_06900) - 1410573..1410755 (-) 183 WP_001211116.1 YjzD family protein -
  YBT1518_RS07175 (YBT1518_06905) - 1410912..1411646 (+) 735 WP_000028690.1 hydrolase -
  YBT1518_RS07180 (YBT1518_06910) - 1411676..1412548 (+) 873 WP_000487723.1 NAD(P)-dependent oxidoreductase -
  YBT1518_RS07185 (YBT1518_06915) comZ 1412603..1412779 (+) 177 WP_001986215.1 ComZ family protein Regulator
  YBT1518_RS07190 (YBT1518_06925) fabH 1413011..1413943 (+) 933 WP_023521420.1 beta-ketoacyl-ACP synthase III -
  YBT1518_RS07195 (YBT1518_06930) fabF 1413975..1415213 (+) 1239 WP_000412656.1 beta-ketoacyl-ACP synthase II -
  YBT1518_RS07200 (YBT1518_06935) - 1415320..1416108 (+) 789 WP_023521421.1 DUF2268 domain-containing protein -
  YBT1518_RS07205 (YBT1518_06940) - 1416253..1416999 (+) 747 WP_000966129.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=63611 YBT1518_RS07185 WP_001986215.1 1412603..1412779(+) (comZ) [Bacillus thuringiensis YBT-1518]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=63611 YBT1518_RS07185 WP_001986215.1 1412603..1412779(+) (comZ) [Bacillus thuringiensis YBT-1518]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCGGAAGCAAAGGCAATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAAGCACAGCCGGTGTTAGAGTTGTTAATGAAAGTTATGAACGAAGCTTATGAGCTTGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment