Detailed information NTG0635762

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: LTQ02_RS12490
• Genome accession: NZ_CP089205
• Coordinates: 2753350..2754354 (+)
• Length: 334 a.a.
• NCBI ID: WP_017083807.1
• Uniprot ID: -
• Organism: Vibrio splendidus strain 4_C08b
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2748350..2759354

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LTQ02_RS12475 (LTQ02_12475)	-	2748736..2750025 (-)	1290	WP_243578734.1	malic enzyme-like NAD(P)-binding protein	-
LTQ02_RS12480 (LTQ02_12480)	rpmE	2750357..2750575 (-)	219	WP_004729688.1	50S ribosomal protein L31	-
LTQ02_RS12485 (LTQ02_12485)	priA	2750908..2753109 (+)	2202	WP_004729689.1	primosomal protein N'	-
LTQ02_RS12490 (LTQ02_12490)	cytR	2753350..2754354 (+)	1005	WP_017083807.1	DNA-binding transcriptional regulator CytR	Regulator
LTQ02_RS12495 (LTQ02_12495)	ftsN	2754477..2755010 (+)	534	WP_004729691.1	cell division protein FtsN	-
LTQ02_RS12500 (LTQ02_12500)	hslV	2755233..2755781 (+)	549	WP_004729692.1	ATP-dependent protease subunit HslV	-
LTQ02_RS12505 (LTQ02_12505)	hslU	2755840..2757180 (+)	1341	WP_017077598.1	HslU--HslV peptidase ATPase subunit	-
LTQ02_RS12510 (LTQ02_12510)	-	2757336..2758253 (+)	918	WP_017080187.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
LTQ02_RS12515 (LTQ02_12515)	rraA	2758327..2758845 (+)	519	WP_017077596.1	ribonuclease E activity regulator RraA	-
LTQ02_RS12520 (LTQ02_12520)	zapB	2758958..2759200 (-)	243	WP_004729696.1	cell division protein ZapB	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36587.11 Da
• Isoelectric Point: 6.4911

>NTDB_id=635762 LTQ02_RS12490 WP_017083807.1 2753350..2754354(+) (cytR) [Vibrio splendidus strain 4_C08b]
MATMKDVAQLAGVSTATVSRALMNPEKVSVSTRKRVETAVLEAGYSPNTLARNLRRNESKTIITIVPDICDPYFAEIIRG
IEDAAVENDYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDHPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLAQLGHKRIAQISGPTTATLCKFRQQGYQQALRRAGVSMNPAYSTVGDFTFEAGAQAVRQLLALPEQPTA
IFCHNDAMAIGAIQETKKLGLRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLDLLKGNDVQAGSRLLE
AKLVVRGSTAPPRM

Nucleotide

• Length: 1005 bp

>NTDB_id=635762 LTQ02_RS12490 WP_017083807.1 2753350..2754354(+) (cytR) [Vibrio splendidus strain 4_C08b]
ATGGCGACAATGAAGGATGTTGCCCAGCTAGCAGGCGTCTCAACGGCAACGGTATCACGTGCATTGATGAACCCTGAAAA
AGTCTCGGTTTCTACTCGTAAACGAGTTGAGACAGCAGTACTTGAAGCTGGATACTCACCCAATACATTAGCTAGAAATT
TACGTCGCAACGAATCAAAAACCATCATCACTATCGTTCCTGATATCTGTGACCCTTACTTCGCCGAAATCATTCGTGGT
ATCGAAGATGCCGCTGTAGAGAATGACTACCTCGTTCTACTGGGTGACAGTGGTCAACAAAAGAAGCGTGAATCTTCATT
TGTTAACTTGGTCTTCACAAAGCAAGCAGACGGTATGCTACTGCTTGGCACTGACCATCCGTTTGATGTCAGTAAGCCTG
AGCAAAAGAATTTACCGCCAATGGTTATGGCGTGTGAATTCGCACCTGAGCTTGAACTGCCAACGGTTCACATCGACAAC
CTAACCTCTGCATTTGAAGCCGTGAATTACCTCGCTCAGTTAGGTCATAAGCGCATCGCTCAGATCTCTGGGCCAACGAC
TGCAACCCTGTGTAAGTTCCGTCAACAAGGCTACCAACAAGCATTGCGCCGCGCTGGAGTATCAATGAACCCAGCTTACA
GCACTGTGGGCGATTTCACCTTTGAAGCGGGTGCGCAAGCGGTTCGTCAATTACTAGCACTTCCTGAACAACCTACAGCG
ATCTTCTGTCATAACGATGCGATGGCGATTGGTGCGATTCAAGAAACGAAGAAGCTAGGTTTACGCGTTCCTCAAGACCT
ATCGATTGTTGGCTTCGATGACATCCAATTCGCTCAATACTGCGATCCACCGCTAACCACTATTTCTCAGCCTCGCTATG
AGATTGGACGCCAAGCGATGTTGATGATGCTTGATCTATTGAAGGGCAACGATGTGCAAGCAGGTTCGCGTCTGCTTGAA
GCTAAATTAGTCGTTAGAGGCAGCACCGCACCACCTCGAATGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-329)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	89.458	99.401	0.889
cytR	Vibrio parahaemolyticus RIMD 2210633	87.688	99.701	0.874