Detailed information NTG0635745

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: LTQ02_RS10765
• Genome accession: NZ_CP089205
• Coordinates: 2408243..2411632 (+)
• Length: 1129 a.a.
• NCBI ID: WP_004734534.1
• Uniprot ID: A0A0P6YSG7
• Organism: Vibrio splendidus strain 4_C08b
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2403243..2416632

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LTQ02_RS10745 (LTQ02_10745)	erpA	2403531..2403872 (-)	342	WP_004734539.1	iron-sulfur cluster insertion protein ErpA	-
LTQ02_RS10750 (LTQ02_10750)	hemL	2404169..2405464 (+)	1296	WP_017084255.1	glutamate-1-semialdehyde 2,1-aminomutase	-
LTQ02_RS10755 (LTQ02_10755)	-	2405808..2406893 (+)	1086	WP_004734536.1	AI-2E family transporter	-
LTQ02_RS10760 (LTQ02_10760)	rsmC	2407004..2408026 (+)	1023	WP_243578796.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
LTQ02_RS10765 (LTQ02_10765)	chiS	2408243..2411632 (+)	3390	WP_004734534.1	response regulator	Regulator
LTQ02_RS10770 (LTQ02_10770)	-	2412343..2414025 (+)	1683	WP_004734533.1	ABC transporter substrate-binding protein	-
LTQ02_RS10775 (LTQ02_10775)	-	2414195..2415181 (+)	987	WP_004734532.1	ABC transporter permease	-
LTQ02_RS10780 (LTQ02_10780)	-	2415184..2416209 (+)	1026	WP_004734531.1	ABC transporter permease	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127177.82 Da
• Isoelectric Point: 5.4266

>NTDB_id=635745 LTQ02_RS10765 WP_004734534.1 2408243..2411632(+) (chiS) [Vibrio splendidus strain 4_C08b]
MFRFYRKQKFKRLQNTLMLAFLVLSITPVTLIAIFFLQSHSQDLQEQSTSHLVSVRDTKQQQIVDYLQAQESQVMGFVRS
ELANASGGRFYGLINAFQRLGLDIDEARSNAQQRYIQGSGDQIKTSILPESSSFIGSERYRLLHKRYHNSYQELLKRSDF
DDILLVDINGNVAYSIFKRDDYGTNLLTGKYKDSNLGVTFQRLAKDVKDKRKSNEDYTPVIVSDFKDENGKQTAWLGAPI
VQQGYLHSYAMFRLPINGITKLIADLNKSSNIQTLLVGDDHLPRSLAHSQESINLSLDVVDKALAGETAVGTFNNTQDQA
IIAAYTPIELKYATWALVVELPEKEAFARIHQLEKIFVIVMLTAIILVFVASHYLSNFITSPLLKLTWAAEKVSAGDLDE
TMINTERKDEIGRLAVSFERMQRSIREKMQLIKSQNGELEDNLKTIQKQNEELQLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGANGPIPANQKYQLDIIINSGQRLATLVDDLLDYHKMRYGSLDIKKSAVDLSAATSLVLELSHHLLGNKPIRI
INQVPSDLGLVSSDPQRLEQVMYNLVGNAIKYTSEGKIVISASVIDDNIRVQVVDTGQGIPAEYLEHIFEPLIQAGQDAS
NYRQGAGLGLSISRQLIELMGGSLYVSSQPMLGTTFSFTLPLATQEELDSYSESGSYSHFQAPDLIDNTQQENSAISENP
DGPLLVIADDEPVNLRVLDSFLKLEGYRVRTACDGPETIELIEKEKPELLLLDIMMPGMSGYQVCEALRKQYDHAQLPII
MLTALNQAEDRVRGFEAGANDYLSKPFNKQELAARITAHLSASKAEQRRLENDQLQLELKHRAMVEANLLETQGRLLEQL
ESAPEAIICIRDDQRIRFANEAAAKLFRRGQEQLKRSMADEIIAPKYLKVEQAHYCGDIDIYIDDTRQRIPSDILKLPEG
SGLDTMYIFNVGGGVNSNRVNNLETAVEALSSYAFEGDKDKLQQLKELGGEFTRLADKATGEGKNKQELMREVLVDVMTN
AIIYWESVTGETKFAFAEKSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLSSIEFILEHCKEQTPERTHIEMLR
DKLQKLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=635745 LTQ02_RS10765 WP_004734534.1 2408243..2411632(+) (chiS) [Vibrio splendidus strain 4_C08b]
ATGTTTAGATTCTATCGTAAGCAGAAGTTTAAGCGCCTTCAAAATACCCTAATGCTGGCATTTCTTGTCCTCAGTATTAC
CCCAGTGACACTTATCGCGATATTTTTCCTCCAGTCGCACAGTCAGGATCTTCAGGAACAAAGTACTTCGCACCTTGTTT
CGGTCCGTGATACTAAGCAACAGCAAATTGTCGATTACCTACAAGCTCAAGAGTCCCAAGTCATGGGCTTTGTTCGCTCA
GAACTTGCCAATGCCAGTGGCGGGCGATTCTATGGTTTAATCAATGCGTTCCAACGCTTAGGGTTAGATATTGACGAAGC
GCGCAGTAATGCGCAGCAGCGTTACATTCAAGGCTCTGGCGATCAAATCAAGACATCGATTCTTCCAGAATCTAGTAGCT
TTATTGGCAGCGAACGTTATCGACTGCTTCACAAGCGCTACCATAACTCATACCAAGAATTGCTTAAGCGTTCAGACTTT
GATGACATTCTATTAGTCGACATTAACGGTAACGTCGCTTACTCAATCTTTAAGCGTGATGATTACGGCACTAACTTGCT
AACAGGTAAGTACAAAGATTCAAACCTAGGCGTTACCTTTCAACGCTTAGCAAAAGACGTAAAAGACAAACGTAAATCCA
ACGAGGACTATACTCCGGTTATCGTTTCTGACTTTAAAGATGAGAACGGTAAGCAGACGGCTTGGTTAGGTGCGCCTATT
GTTCAACAAGGCTACCTGCACAGTTACGCCATGTTTAGGCTGCCAATCAATGGGATTACTAAGCTAATTGCGGATCTCAA
CAAGAGTTCAAATATTCAAACACTGCTTGTGGGGGATGATCACCTGCCACGCAGCCTCGCCCATTCGCAAGAGTCGATTA
ATTTAAGCTTAGACGTTGTCGATAAAGCATTAGCTGGCGAAACGGCCGTAGGTACGTTCAACAACACTCAAGATCAAGCG
ATCATCGCAGCATATACCCCAATTGAGCTGAAATACGCAACATGGGCTCTTGTCGTAGAGCTGCCAGAAAAAGAGGCGTT
TGCCCGTATTCATCAGTTAGAAAAGATCTTCGTGATCGTGATGCTCACAGCGATCATTCTTGTGTTTGTCGCATCGCATT
ATCTGTCCAATTTCATCACTTCCCCTCTCCTCAAACTGACGTGGGCTGCCGAGAAAGTCTCTGCTGGTGATCTTGATGAA
ACCATGATCAATACCGAACGCAAAGATGAAATAGGCCGACTGGCGGTTAGCTTCGAAAGAATGCAGCGATCGATCCGTGA
AAAAATGCAGCTCATCAAGAGCCAAAACGGTGAGCTTGAGGACAACCTTAAGACCATTCAAAAGCAAAATGAAGAGTTGC
AACTGGCGAACAAACTTAAAGATGAATTCTTAGCCACCACCTCACATGAATTGAGAACGCCATTGCATGGCATGGTTGGT
ATCGCTGAAGCGCTAATATCTGGTGCTAACGGCCCTATTCCTGCCAACCAGAAGTACCAATTGGATATCATCATCAATAG
TGGTCAGAGGTTGGCTACACTGGTTGATGACCTGCTTGATTATCACAAGATGCGCTATGGCAGCTTGGATATTAAGAAGT
CTGCTGTTGATTTATCTGCAGCCACCAGCTTAGTGCTTGAGTTATCTCATCACCTGTTAGGTAACAAGCCAATCCGCATC
ATTAACCAAGTGCCAAGCGATTTAGGTCTCGTTTCATCGGATCCTCAACGACTTGAGCAAGTGATGTATAACTTGGTTGG
CAATGCTATCAAGTACACATCAGAAGGTAAGATTGTTATCTCAGCAAGCGTCATCGACGACAACATTCGAGTACAAGTTG
TTGATACCGGTCAAGGTATACCTGCTGAATATCTTGAACACATCTTTGAGCCATTGATTCAAGCTGGCCAAGACGCAAGT
AACTATCGCCAAGGTGCCGGCCTTGGGTTATCCATCAGTCGTCAGTTAATCGAGTTGATGGGTGGTTCGCTGTATGTAAG
TAGCCAGCCGATGCTTGGCACTACATTCAGCTTCACATTACCTTTAGCTACCCAAGAAGAACTGGATAGCTACAGTGAGT
CAGGGAGCTACTCACACTTCCAAGCGCCGGATTTAATTGATAACACTCAGCAAGAAAACAGCGCTATCAGTGAAAACCCA
GATGGCCCGTTATTGGTTATCGCCGATGATGAGCCGGTGAACCTGCGCGTATTAGACAGCTTCTTGAAGCTAGAAGGTTA
TCGAGTTCGCACCGCCTGTGACGGCCCTGAGACCATTGAACTGATTGAAAAAGAGAAACCAGAGTTACTTCTGCTCGACA
TCATGATGCCAGGTATGAGCGGCTATCAGGTTTGTGAAGCACTGCGTAAGCAATACGATCATGCACAATTGCCAATCATC
ATGCTAACGGCACTCAACCAAGCGGAAGACCGTGTTCGCGGTTTCGAAGCGGGTGCCAACGATTACTTGTCTAAACCGTT
CAACAAACAAGAACTGGCGGCGCGAATTACGGCTCACTTATCAGCAAGCAAAGCTGAGCAAAGGCGTCTTGAGAATGATC
AATTGCAACTAGAGCTCAAACACCGAGCTATGGTTGAAGCTAACCTACTAGAAACTCAAGGCCGCTTGTTGGAGCAGTTG
GAGTCAGCCCCTGAAGCCATCATCTGTATTCGTGATGACCAACGTATTCGCTTTGCCAACGAAGCGGCTGCTAAGCTGTT
TAGACGTGGGCAAGAACAACTCAAGCGCTCAATGGCCGACGAGATCATCGCGCCTAAATACCTGAAGGTGGAACAAGCTC
ACTACTGTGGTGATATTGATATCTATATAGACGACACACGTCAGCGCATTCCAAGTGACATCCTTAAGCTACCTGAAGGC
TCAGGGCTCGACACCATGTATATCTTCAATGTCGGTGGTGGCGTTAACTCAAACCGAGTCAATAACCTTGAAACAGCGGT
TGAGGCACTTTCAAGCTACGCCTTTGAAGGTGACAAAGATAAGCTTCAACAACTGAAAGAGCTTGGCGGTGAATTTACTC
GCCTTGCTGATAAGGCAACCGGTGAGGGTAAAAACAAGCAAGAGCTGATGCGTGAAGTACTAGTCGATGTCATGACCAAT
GCCATTATCTACTGGGAGTCTGTTACTGGGGAGACCAAGTTTGCTTTCGCAGAAAAGAGTGGCTTATGGCGAGTCTACTT
AGACCGCAGTACCCTACAAACTAGAACGCTAGACAAATACCTACGAGTAGAAACTCTACCGAAAACACCTCGCTGGCGAA
CGGTACTGAGCTCTATCGAATTCATACTTGAGCACTGTAAAGAACAAACACCAGAAAGAACTCATATCGAGATGCTAAGG
GATAAACTACAGAAACTACTGACCAGCTAA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Response regulator receiver domain (Response_reg) (726-836)

• PAS domain (PAS_8) (880-914)

• HAMP domain (HAMP) (375-427)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

3D structure

• AlphaFold DB: A0A0P6YSG7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.351	100	0.764