Detailed information NTG0635516

Bioinformatically predicted

Overview

• Name: ccrA
• Type: Machinery gene
• Locus tag: LTK21_RS03870
• Genome accession: NZ_CP089161
• Coordinates: 782594..783943 (-)
• Length: 449 a.a.
• NCBI ID: WP_000815640.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain UNC_SaCF13
• Function: promote SCCmec transfer (predicted from homology) Homologous recombination

Genomic Context

Location: 777594..788943

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LTK21_RS03850 (LTK21_03850)	-	779153..779659 (-)	507	WP_001092189.1	DUF1643 domain-containing protein	-
LTK21_RS03855 (LTK21_03855)	-	779674..779985 (-)	312	WP_000700851.1	DUF960 family protein	-
LTK21_RS03860 (LTK21_03860)	-	780072..780422 (-)	351	WP_000849672.1	SAUGI family uracil-DNA glycosylase inhibitor	-
LTK21_RS03865 (LTK21_03865)	ccrB	780944..782572 (-)	1629	WP_001186608.1	cassette chromosome recombinase CcrB	Machinery gene
LTK21_RS03870 (LTK21_03870)	ccrA	782594..783943 (-)	1350	WP_000815640.1	cassette chromosome recombinase CcrA	Machinery gene
LTK21_RS03875 (LTK21_03875)	cch1	784177..785964 (-)	1788	WP_000122620.1	cassette chromosome replicative helicase	-
LTK21_RS03880 (LTK21_03880)	ssb	785964..786254 (-)	291	WP_001036438.1	cassette chromosome ssDNA-binding protein	-
LTK21_RS03885 (LTK21_03885)	-	786393..787442 (+)	1050	WP_000613248.1	hypothetical protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 52663.34 Da
• Isoelectric Point: 9.9639

>NTDB_id=635516 LTK21_RS03870 WP_000815640.1 782594..783943(-) (ccrA) [Staphylococcus aureus strain UNC_SaCF13]
MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQITQLIQQGQCDILCCYRLNRLHRN
LKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIFISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYEYH
NGTFIINQNESPTVKAVFNYYIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI
YEQAQRLRLQKQTKQTPSDNQLKQKIKCPCCNATLTNMTIRKKNHTLRYYVCPKNMNASRFVCDFKGINAQTLEDKVLEV
CRDFYQNQRIYTKIKSAIDKRIKRQRNIEKHHTLTQEQLIEKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHIIQ
NIIQKRFTLNILYPYIETIHITKDKNLIGIYFKNEPLNIVNQTMQSSIA

Nucleotide

• Length: 1350 bp

>NTDB_id=635516 LTK21_RS03870 WP_000815640.1 782594..783943(-) (ccrA) [Staphylococcus aureus strain UNC_SaCF13]
ATGAAACAAGTCATAGGCTATTTACGTCAAAGTACGATGAAACAACAATCTCTTGCAGCACAGAAACAAGCTATCGAAGC
AATAGCCGAAAAACATCATATTCAACATATCAACTTTTATAGCGACAAACAATCAGGTCGCAAAGATAATCGTAGTGGGT
ATCGACAAATAACACAATTAATTCAACAAGGACAGTGTGACATATTATGCTGTTATCGTCTTAATAGGTTGCATCGTAAT
CTGAAAAATGCATTAAAACTCATCAAATTATGTCAAACGTACCATGTTCATATCTTAAGCGTACATGATGGTTACTTTGA
TATGGATCAAGCTTTCGACCGACTCAAGCTTAATATCTTCATCAGTTTAGCCGAACTTGAATCGGATAACATTGGAGAAC
AAGTCAGAAATGGGCTTCAAGAAAAAGCAAAGCAAGGTCGATTGATTACAACACATGCACCTTTTGGTTACGAATATCAC
AACGGAACATTCATCATCAATCAAAATGAGTCACCAACGGTAAAGGCTGTATTCAATTATTACATTAAAGGTCATGGTTA
TAAGAAAATTGCACAGTTATTAGAAGAAGATAACACGTATATCAATCGACAACCCTATCAAGTTCGTAACATTATCATCA
ATCCTAATTATTGTGGTCGTGTCAACAATCAATATGGCCAATTCGACAATATGTTTCCTTCTATTGTTTCCACAAGTATA
TATGAGCAAGCGCAGAGACTTCGATTGCAAAAACAAACCAAACAGACACCTTCGGATAATCAACTCAAACAAAAAATCAA
ATGCCCATGTTGTAATGCAACACTTACAAATATGACCATTAGAAAAAAGAATCATACATTACGTTACTACGTCTGTCCTA
AAAACATGAATGCTTCACGCTTTGTCTGTGATTTTAAAGGCATCAATGCACAAACACTTGAAGATAAAGTATTAGAAGTG
TGCCGAGACTTTTATCAAAATCAACGCATCTACACAAAAATTAAAAGTGCGATTGACAAACGCATCAAAAGACAAAGAAA
CATAGAAAAACATCACACATTGACTCAAGAACAACTGATAGAAAAGTTGGCACAAGGCATCATTGATGCAGAAACGTTCA
GAGAGCAAACACAATCATTACGTCAACAACCGCAACGCACTACATCTATCAATGGGCATCAAATACAACACATCATTCAA
AATATTATTCAAAAACGTTTCACGTTAAACATATTGTACCCCTATATTGAAACCATTCACATTACGAAAGATAAAAATCT
TATAGGAATCTATTTCAAAAATGAACCACTCAATATTGTCAATCAAACCATGCAATCATCGATTGCATAA

Domains

Predicted by InterProScan.

• Resolvase, N terminal domain (Resolvase) (4-147)

• Recombinase zinc beta ribbon domain (Zn_ribbon_recom) (262-321)

• Recombinase (Recombinase) (169-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccrA	Staphylococcus aureus N315	97.55	100	0.976
ccrA	Staphylococcus aureus COL	75.947	100	0.759