Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   N7985_RS05475 Genome accession   NZ_CP106673
Coordinates   1055608..1056351 (+) Length   247 a.a.
NCBI ID   WP_003233230.1    Uniprot ID   G4NRP4
Organism   Bacillus subtilis strain SRCM116268     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1050608..1061351
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N7985_RS05440 (N7985_05440) yhaI 1050938..1051279 (+) 342 WP_009966921.1 YhaI family protein -
  N7985_RS05445 (N7985_05445) scoC 1051276..1051887 (-) 612 WP_003239501.1 HTH-type transcriptional regulator Hpr -
  N7985_RS05450 (N7985_05450) yhaH 1052065..1052421 (-) 357 WP_003245875.1 YtxH domain-containing protein -
  N7985_RS05455 (N7985_05455) - 1052550..1052741 (+) 192 WP_014476318.1 hypothetical protein -
  N7985_RS05460 (N7985_05460) trpP 1052815..1053333 (-) 519 WP_003233236.1 tryptophan transporter TrpP -
  N7985_RS05465 (N7985_05465) serC 1053458..1054537 (-) 1080 WP_041851021.1 3-phosphoserine/phosphohydroxythreonine transaminase -
  N7985_RS05470 (N7985_05470) hinT 1054684..1055121 (-) 438 WP_003233231.1 HIT family protein -
  N7985_RS05475 (N7985_05475) pptA 1055608..1056351 (+) 744 WP_003233230.1 ABC transporter ATP-binding protein EcsA Regulator
  N7985_RS05480 (N7985_05480) ecsB 1056344..1057570 (+) 1227 WP_017695369.1 ABC transporter permease EcsB -
  N7985_RS05485 (N7985_05485) ecsC 1057590..1058300 (+) 711 WP_015715605.1 EcsC family protein -
  N7985_RS05490 (N7985_05490) sndC 1058318..1059508 (-) 1191 WP_015715606.1 N-acetyl amino acid acetylase SndC -
  N7985_RS05495 (N7985_05495) - 1059580..1060971 (-) 1392 WP_080332595.1 hypothetical protein -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27722.20 Da        Isoelectric Point: 5.9114

>NTDB_id=635457 N7985_RS05475 WP_003233230.1 1055608..1056351(+) (pptA) [Bacillus subtilis strain SRCM116268]
MSLLSVKDLTGGYTRNPVLKNVSFTLEPNQIVGLIGLNGAGKSTTIRHIIGLMDPHKGSIELNGKTFAEDPEGYRSQFTY
IPETPVLYEELTLMEHLELTAMAYGLSKETMEKRLPPLLKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFLAEPALYIIDE
PFLGLDPLAINALLERMNEAKKGGASVLMSTHILATAERYCDSFIILHNGEVRARGTLSELREQFGMKDAALDDLYLELT
KEDAGHE

Nucleotide


Download         Length: 744 bp        

>NTDB_id=635457 N7985_RS05475 WP_003233230.1 1055608..1056351(+) (pptA) [Bacillus subtilis strain SRCM116268]
ATGTCTCTGCTATCGGTAAAAGACTTGACCGGCGGATATACAAGGAATCCGGTTTTAAAAAACGTATCATTCACCCTTGA
ACCGAATCAAATTGTTGGCTTAATCGGGCTGAATGGTGCTGGTAAAAGTACAACAATCAGACACATCATCGGGCTGATGG
ACCCGCATAAAGGTTCAATCGAATTAAACGGTAAAACGTTTGCTGAGGATCCGGAAGGCTACCGTTCACAATTTACCTAT
ATACCTGAAACACCTGTTTTATACGAAGAATTGACGCTGATGGAGCATCTTGAACTAACAGCCATGGCATATGGACTGTC
AAAAGAAACGATGGAGAAAAGGCTGCCTCCGCTTTTAAAGGAATTCCGAATGGAAAAGAGGCTGAAGTGGTTCCCGGCCC
ATTTTTCTAAAGGAATGAAGCAGAAGGTTATGATTATGTGCGCATTTTTGGCAGAGCCTGCGCTCTACATTATTGATGAG
CCTTTTCTAGGGCTTGATCCGCTTGCCATTAACGCGCTGCTTGAGCGGATGAATGAAGCGAAAAAGGGCGGGGCGAGCGT
GCTGATGTCAACGCACATTTTGGCAACGGCAGAACGCTATTGCGATTCGTTTATTATTTTACATAACGGCGAGGTGCGGG
CGCGCGGCACGCTGTCAGAGCTCAGAGAGCAGTTTGGAATGAAGGACGCGGCGCTGGACGATTTGTATCTTGAGCTTACA
AAGGAAGACGCTGGCCATGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-162)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NRP4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

56.904

96.761

0.551
  pptA Streptococcus thermophilus LMD-9

56.485

96.761

0.547