Detailed information NTG0635433

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: N7985_RS01625
• Genome accession: NZ_CP106673
• Coordinates: 295463..296584 (+)
• Length: 373 a.a.
• NCBI ID: WP_015715201.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM116268
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 290463..301584

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N7985_RS01600 (N7985_01600)	ycdA	290471..291535 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
N7985_RS01605 (N7985_01605)	-	291558..291689 (-)	132	WP_003246334.1	hypothetical protein	-
N7985_RS01610 (N7985_01610)	ycdB	291863..293281 (+)	1419	WP_015715198.1	YcdB/YcdC domain-containing protein	-
N7985_RS01615 (N7985_01615)	ycdC	293468..294829 (+)	1362	WP_041520542.1	YcdB/YcdC domain-containing protein	-
N7985_RS01620 (N7985_01620)	cwlK	294837..295340 (-)	504	WP_015715200.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
N7985_RS01625 (N7985_01625)	rapF	295463..296584 (+)	1122	WP_015715201.1	response regulator aspartate phosphatase RapJ	Regulator
N7985_RS01630 (N7985_01630)	ycdF	296691..297467 (+)	777	WP_003234739.1	SDR family oxidoreductase	-
N7985_RS01635 (N7985_01635)	ycdG	297492..299177 (+)	1686	WP_015715202.1	alpha-glucosidase	-
N7985_RS01640 (N7985_01640)	znuA	299365..300324 (+)	960	WP_015715203.1	metal ABC transporter substrate-binding protein	-
N7985_RS01645 (N7985_01645)	znuC	300379..301074 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44400.29 Da
• Isoelectric Point: 4.8344

>NTDB_id=635433 N7985_RS01625 WP_015715201.1 295463..296584(+) (rapF) [Bacillus subtilis strain SRCM116268]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=635433 N7985_RS01625 WP_015715201.1 295463..296584(+) (rapF) [Bacillus subtilis strain SRCM116268]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTACTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATTGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCATACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCTTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGACAGCTTCTTGCTGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405