Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   LTK19_RS06595 Genome accession   NZ_CP089156
Coordinates   1233643..1234308 (-) Length   221 a.a.
NCBI ID   WP_000697879.1    Uniprot ID   -
Organism   Staphylococcus aureus strain UNC_SaCF35     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1228643..1239308
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LTK19_RS06575 (LTK19_06575) - 1229097..1229210 (-) 114 WP_014937089.1 hypothetical protein -
  LTK19_RS06580 (LTK19_06580) - 1229886..1231886 (-) 2001 WP_000776744.1 ABC transporter permease -
  LTK19_RS06585 (LTK19_06585) - 1231883..1232638 (-) 756 WP_000923764.1 ABC transporter ATP-binding protein -
  LTK19_RS06590 (LTK19_06590) braS 1232745..1233632 (-) 888 WP_000143418.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  LTK19_RS06595 (LTK19_06595) braR 1233643..1234308 (-) 666 WP_000697879.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  LTK19_RS06600 (LTK19_06600) - 1234334..1234534 (-) 201 WP_000604727.1 hypothetical protein -
  LTK19_RS06605 (LTK19_06605) - 1234732..1236156 (+) 1425 WP_000953743.1 alkaline phosphatase -
  LTK19_RS14255 - 1236216..1236317 (-) 102 WP_000731972.1 SE2200 family small protein -
  LTK19_RS06615 (LTK19_06615) - 1236439..1236894 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  LTK19_RS06620 (LTK19_06620) - 1237139..1237900 (-) 762 WP_000323448.1 alpha/beta hydrolase family protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25388.46 Da        Isoelectric Point: 4.7961

>NTDB_id=635407 LTK19_RS06595 WP_000697879.1 1233643..1234308(-) (braR) [Staphylococcus aureus strain UNC_SaCF35]
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQHQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSLTVKGCTLILDEAKVVYQEQSIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=635407 LTK19_RS06595 WP_000697879.1 1233643..1234308(-) (braR) [Staphylococcus aureus strain UNC_SaCF35]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAAAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAACATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAGCCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCATTGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAGCATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACGCGCCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

99.548

100

0.995