Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   LTK19_RS03020 Genome accession   NZ_CP089156
Coordinates   531357..532400 (-) Length   347 a.a.
NCBI ID   WP_232043991.1    Uniprot ID   -
Organism   Staphylococcus aureus strain UNC_SaCF35     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 526357..537400
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LTK19_RS02990 (LTK19_02990) - 526778..528034 (-) 1257 WP_001793983.1 aminopeptidase -
  LTK19_RS02995 (LTK19_02995) - 528037..528237 (-) 201 WP_000180460.1 DUF1128 family protein -
  LTK19_RS03000 (LTK19_03000) - 528384..528848 (+) 465 WP_000228670.1 low molecular weight protein-tyrosine-phosphatase -
  LTK19_RS03005 (LTK19_03005) - 528855..529130 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  LTK19_RS03010 (LTK19_03010) - 529408..530625 (+) 1218 WP_000037081.1 YihY/virulence factor BrkB family protein -
  LTK19_RS03015 (LTK19_03015) vraR 530738..531367 (-) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  LTK19_RS03020 (LTK19_03020) vraS 531357..532400 (-) 1044 WP_232043991.1 sensor histidine kinase Regulator
  LTK19_RS03025 (LTK19_03025) liaF 532397..533098 (-) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  LTK19_RS03030 (LTK19_03030) - 533113..533499 (-) 387 WP_001110178.1 hypothetical protein -
  LTK19_RS03035 (LTK19_03035) map 533716..534474 (-) 759 WP_000636142.1 type I methionyl aminopeptidase -
  LTK19_RS03040 (LTK19_03040) - 535059..536045 (+) 987 WP_001014423.1 aromatic acid exporter family protein -
  LTK19_RS03045 (LTK19_03045) - 536234..536647 (-) 414 WP_001643743.1 hypothetical protein -
  LTK19_RS03050 (LTK19_03050) - 536676..536786 (-) 111 WP_001790257.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40034.48 Da        Isoelectric Point: 6.0577

>NTDB_id=635401 LTK19_RS03020 WP_232043991.1 531357..532400(-) (vraS) [Staphylococcus aureus strain UNC_SaCF35]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQISILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=635401 LTK19_RS03020 WP_232043991.1 531357..532400(-) (vraS) [Staphylococcus aureus strain UNC_SaCF35]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGACTT
ATACCATACACTTGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTTTCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTTC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGCTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

99.712

100

0.997