Detailed information NTG0635400

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: N7980_RS18305
• Genome accession: NZ_CP106671
• Coordinates: 3555153..3556328 (-)
• Length: 391 a.a.
• NCBI ID: WP_129138130.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM116301
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3550153..3561328

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N7980_RS18285 (N7980_18285)	-	3552173..3552466 (-)	294	WP_231573529.1	cystatin-like fold lipoprotein	-
N7980_RS18290 (N7980_18290)	-	3552425..3553345 (+)	921	Protein_3600	tyrosine-type recombinase/integrase	-
N7980_RS18295 (N7980_18295)	-	3553711..3555021 (+)	1311	WP_129138132.1	hypothetical protein	-
N7980_RS18305 (N7980_18305)	rapC	3555153..3556328 (-)	1176	WP_129138130.1	response regulator aspartate phosphatase RapI	Regulator
N7980_RS18310 (N7980_18310)	-	3556577..3557785 (+)	1209	WP_129138129.1	hypothetical protein	-
N7980_RS18315 (N7980_18315)	-	3558016..3558393 (-)	378	WP_396127485.1	cystatin-like fold lipoprotein	-
N7980_RS18320 (N7980_18320)	-	3558456..3558962 (-)	507	WP_129138127.1	hypothetical protein	-
N7980_RS18325 (N7980_18325)	cwlT	3558977..3559966 (-)	990	WP_087961683.1	bifunctional lytic transglycosylase/C40 family peptidase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 46604.03 Da
• Isoelectric Point: 4.9642

>NTDB_id=635400 N7980_RS18305 WP_129138130.1 3555153..3556328(-) (rapC) [Bacillus subtilis strain SRCM116301]
MRSVFLDKDKIPYDLVTKKLNEWYTSIKNDQVEKAEIIKTEVEKELLNMEENQDALLYYQLLEFRHEIMLSYMNSKEIED
LHNAYETIKEIEKQGQLTGMLEYYFYFFKGMYEFRRKELTTAISAYRIAESKLSEVEDEIEKAEFFFKVSYVYYYMKQTY
FSMNYANRALKIFREYEEYAVQTVRCQFIVAGNLIDSLEYERALEQFLNSLEISKESNIDHLIAMSHMNIGICYDELKEY
KKASQHLILALEIFEKSKHSFLTKTLFTLTYVEAKQQNYDVALTYFRKGRLIADKSDDKEYSAKFKILEGLFFSDGENQL
IKNAFSYLTSRKMFADVENFSIEVADYFHEQGNLMLSNEYYRMSIEARRKIKKGEIINENQPDSIGSSDFR

Nucleotide

• Length: 1176 bp

>NTDB_id=635400 N7980_RS18305 WP_129138130.1 3555153..3556328(-) (rapC) [Bacillus subtilis strain SRCM116301]
TTGCGGAGTGTTTTCTTAGATAAAGATAAAATTCCGTACGACCTAGTTACAAAAAAGTTAAATGAATGGTATACATCAAT
AAAAAATGATCAAGTTGAAAAAGCAGAGATTATAAAAACAGAAGTAGAGAAAGAATTACTAAACATGGAAGAAAACCAAG
ATGCATTGTTATATTATCAGCTATTGGAATTTAGGCACGAGATAATGCTGAGTTATATGAATTCTAAGGAAATAGAAGAT
CTCCATAATGCTTATGAAACTATAAAAGAAATTGAGAAGCAAGGGCAATTAACCGGCATGTTGGAATACTATTTTTACTT
TTTTAAGGGTATGTACGAGTTTAGACGTAAAGAATTAACTACAGCGATAAGTGCCTATCGAATAGCAGAATCAAAGTTGT
CTGAAGTTGAGGATGAAATAGAAAAAGCAGAGTTTTTTTTCAAAGTGTCCTATGTATATTATTATATGAAACAAACATAC
TTCTCTATGAATTATGCAAATCGTGCACTCAAAATATTTAGAGAGTATGAAGAGTATGCTGTCCAGACTGTGCGTTGTCA
ATTTATTGTAGCAGGAAACTTGATCGATTCTTTAGAATATGAAAGAGCTTTGGAGCAATTTTTGAATTCTTTGGAAATCT
CCAAGGAAAGTAATATAGATCATTTAATTGCAATGTCACACATGAATATTGGAATTTGTTATGATGAATTGAAAGAATAT
AAAAAGGCTTCACAACATTTAATCTTGGCTTTAGAAATTTTTGAAAAATCAAAACATAGTTTCCTAACAAAGACTTTATT
CACTTTAACCTACGTTGAAGCAAAACAACAAAATTATGATGTTGCTTTGACATACTTTAGGAAAGGTCGATTAATTGCCG
ATAAAAGTGATGATAAGGAATACTCAGCGAAATTCAAAATATTAGAGGGATTATTTTTTTCTGATGGTGAGAATCAATTA
ATAAAGAATGCATTTTCATATCTAACTTCGAGAAAAATGTTTGCTGATGTTGAAAATTTTTCGATTGAAGTCGCTGATTA
TTTTCATGAACAAGGAAATTTAATGCTCTCTAATGAATATTATCGTATGAGTATTGAAGCAAGACGAAAAATTAAAAAAG
GGGAGATTATTAATGAAAATCAGCCGGATTCTATTGGCAGCAGTGATTTTAGGTAG

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (199-256)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (10-70)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	37.701	95.652	0.361