Detailed information NTG0635356

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: N7980_RS12495
• Genome accession: NZ_CP106671
• Coordinates: 2440629..2441618 (-)
• Length: 329 a.a.
• NCBI ID: WP_003232026.1
• Uniprot ID: P51835
• Organism: Bacillus subtilis strain SRCM116301
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2435629..2446618

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N7980_RS12455 (N7980_12455)	trmD	2435856..2436587 (-)	732	WP_003232011.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
N7980_RS12460 (N7980_12460)	rimM	2436584..2437108 (-)	525	WP_041850834.1	ribosome maturation factor RimM	-
N7980_RS12465 (N7980_12465)	ylqD	2437113..2437499 (-)	387	WP_014476793.1	YlqD family protein	-
N7980_RS12470 (N7980_12470)	khpA	2437621..2437866 (-)	246	WP_041850835.1	KH domain-containing protein	-
N7980_RS12475 (N7980_12475)	rpsP	2437866..2438138 (-)	273	WP_003220815.1	30S ribosomal protein S16	-
N7980_RS12480 (N7980_12480)	ffh	2438244..2439584 (-)	1341	WP_014113771.1	signal recognition particle protein	-
N7980_RS12485 (N7980_12485)	srpM	2439598..2439930 (-)	333	WP_003238590.1	putative DNA-binding protein	-
N7980_RS12490 (N7980_12490)	sivC	2440107..2440592 (+)	486	WP_003245834.1	Ig-like domain-containing protein	-
N7980_RS12495 (N7980_12495)	pilA	2440629..2441618 (-)	990	WP_003232026.1	signal recognition particle-docking protein FtsY	Machinery gene
N7980_RS12500 (N7980_12500)	smc	2441638..2445198 (-)	3561	WP_128472225.1	chromosome segregation protein SMC	-
N7980_RS12505 (N7980_12505)	rncS	2445299..2446048 (-)	750	WP_003232030.1	ribonuclease III	-
N7980_RS12510 (N7980_12510)	acpP	2446188..2446421 (-)	234	WP_003154310.1	acyl carrier protein	-

Sequence

Protein

• Length: 329 a.a.
• Molecular weight: 36342.52 Da
• Isoelectric Point: 5.0164

>NTDB_id=635356 N7980_RS12495 WP_003232026.1 2440629..2441618(-) (pilA) [Bacillus subtilis strain SRCM116301]
MSFFKKLKEKITKQTDSVSEKFKDGLEKTRNSFQNKVNDLVSRYRKVDEDFFEELEEVLISADVGFTTVMELIDELKKEV
KRRNIQDPKEVQSVISEKLVEIYNSGDEQISELNIQDGRLNVILLVGVNGVGKTTTIGKLAHKMKQEGKSVVLAAGDTFR
AGAIEQLEVWGERTGVPVIKQTAGSDPAAVIYDAVHAAKARNADVLICDTAGRLQNKVNLMKELEKVKRVIEREVPEAPH
EVLLALDATTGQNAMAQAKEFSKATNVTGIALTKLDGTAKGGIVLAIRNELHIPVKLVGLGEKVDDLQEFDPESYVYGLF
SDLVEKADD

Nucleotide

• Length: 990 bp

>NTDB_id=635356 N7980_RS12495 WP_003232026.1 2440629..2441618(-) (pilA) [Bacillus subtilis strain SRCM116301]
ATGAGCTTTTTTAAAAAATTAAAAGAGAAAATCACAAAACAGACAGATTCCGTATCTGAAAAGTTTAAGGATGGCCTTGA
AAAAACAAGAAACTCCTTTCAAAACAAAGTGAATGATCTTGTATCCCGTTACCGTAAAGTGGATGAGGATTTCTTCGAAG
AGCTTGAAGAGGTTCTTATCAGCGCGGATGTCGGTTTTACAACCGTTATGGAATTAATAGATGAACTGAAAAAAGAAGTC
AAACGCAGAAATATTCAAGATCCAAAGGAAGTCCAGTCAGTGATTTCTGAGAAACTGGTCGAGATTTATAACAGCGGAGA
TGAGCAAATTTCAGAACTGAACATCCAGGATGGGCGTTTAAACGTAATCCTTCTGGTAGGTGTAAACGGCGTCGGGAAAA
CAACAACGATCGGAAAGCTTGCCCATAAAATGAAACAAGAAGGAAAATCTGTCGTACTTGCCGCCGGAGACACTTTCAGA
GCGGGAGCCATTGAACAGCTGGAAGTATGGGGAGAGCGTACAGGAGTGCCTGTCATTAAGCAGACGGCAGGAAGCGATCC
GGCGGCTGTCATCTACGATGCTGTTCATGCTGCGAAAGCAAGAAATGCCGATGTATTAATTTGTGATACGGCAGGGCGTC
TCCAAAACAAAGTAAATCTCATGAAAGAGCTTGAAAAAGTAAAACGTGTTATCGAAAGAGAAGTTCCTGAAGCTCCGCAT
GAGGTGCTGCTTGCCCTTGATGCCACGACCGGCCAAAATGCAATGGCTCAGGCAAAAGAATTCTCTAAAGCAACAAATGT
TACCGGCATTGCTTTAACGAAGCTTGACGGTACGGCAAAAGGCGGTATCGTCCTTGCGATTCGCAACGAGCTTCACATCC
CGGTTAAACTAGTCGGTTTAGGAGAAAAAGTTGATGACCTTCAGGAATTTGATCCAGAATCCTATGTGTACGGACTCTTT
TCAGATTTAGTGGAAAAAGCCGACGATTAA

Domains

Predicted by InterProScan.

• SRP54-type protein, GTPase domain (SRP54) (121-320)

• SRP54-type protein, helical bundle domain (SRP54_N) (34-99)

3D structure

• AlphaFold DB: P51835

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	43.709	91.793	0.401