Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   LTK15_RS00695 Genome accession   NZ_CP089154
Coordinates   144457..145173 (-) Length   238 a.a.
NCBI ID   WP_031895407.1    Uniprot ID   -
Organism   Staphylococcus aureus strain UNC_SaCF36     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 139457..150173
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LTK15_RS00675 (LTK15_00675) - 140549..141499 (+) 951 WP_000790314.1 LacI family DNA-binding transcriptional regulator -
  LTK15_RS00680 (LTK15_00680) - 141648..143132 (+) 1485 WP_000141419.1 sucrose-6-phosphate hydrolase -
  LTK15_RS00685 (LTK15_00685) - 143129..144088 (+) 960 WP_001253295.1 carbohydrate kinase -
  LTK15_RS00690 (LTK15_00690) - 144278..144385 (-) 108 WP_031785433.1 hypothetical protein -
  LTK15_RS00695 (LTK15_00695) agrA 144457..145173 (-) 717 WP_031895407.1 quorum-sensing response regulator AgrA Regulator
  LTK15_RS00700 (LTK15_00700) agrC 145192..146484 (-) 1293 WP_001657119.1 quorum-sensing sensor histidine kinase AgrC -
  LTK15_RS00705 (LTK15_00705) agrD 146509..146649 (-) 141 WP_001093929.1 cyclic lactone autoinducer peptide AgrD -
  LTK15_RS00710 (LTK15_00710) agrB 146646..147215 (-) 570 WP_001105708.1 accessory gene regulator AgrB -
  LTK15_RS13780 (LTK15_00715) hld 147504..147584 (+) 81 WP_000046022.1 delta-hemolysin -
  LTK15_RS00720 (LTK15_00720) - 148185..148970 (-) 786 WP_196579368.1 carbon-nitrogen family hydrolase -
  LTK15_RS00725 (LTK15_00725) - 149331..149957 (-) 627 WP_000522375.1 nitroreductase family protein -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27966.00 Da        Isoelectric Point: 6.0927

>NTDB_id=635345 LTK15_RS00695 WP_031895407.1 144457..145173(-) (agrA) [Staphylococcus aureus strain UNC_SaCF36]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIEFIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=635345 LTK15_RS00695 WP_031895407.1 144457..145173(-) (agrA) [Staphylococcus aureus strain UNC_SaCF36]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATCAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACGTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAGGATGATCCAGCAGAATTAAGAACACGTATTATAGACTGTTTAGAAACTGCACATACACGCTTACAATTAT
TATCAAAAGATAATAGCGTTGAAACGATTGAGTTAAAACGTGGCAGTAATTCTGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACTAAGTCACACAGACTCATTGCGCATTTAGACAATCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGCTTCTTCAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATTTATTG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

99.58

100

0.996