Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   LRO88_RS06720 Genome accession   NZ_CP089148
Coordinates   1274031..1274687 (+) Length   218 a.a.
NCBI ID   WP_003232942.1    Uniprot ID   A0AAQ3ENL6
Organism   Bacillus subtilis strain NIB353     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1269031..1279687
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LRO88_RS06690 oppF 1269493..1270410 (+) 918 WP_003239287.1 oligopeptide ABC transporter ATP-binding protein OppF -
  LRO88_RS06695 yjbB 1270517..1271734 (+) 1218 WP_087614503.1 MFS transporter -
  LRO88_RS06700 yjbC 1271898..1272476 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  LRO88_RS06705 spx 1272657..1273052 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  LRO88_RS06710 yjbE 1273098..1273754 (-) 657 WP_128740217.1 TerC family protein -
  LRO88_RS06715 - 1273924..1274064 (+) 141 WP_119122854.1 hypothetical protein -
  LRO88_RS06720 mecA 1274031..1274687 (+) 657 WP_003232942.1 adaptor protein MecA Regulator
  LRO88_RS06725 - 1274682..1274804 (-) 123 WP_021479547.1 hypothetical protein -
  LRO88_RS06730 coiA 1274848..1275999 (+) 1152 WP_159376764.1 competence protein CoiA Machinery gene
  LRO88_RS06735 pepF 1276229..1278058 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  LRO88_RS06740 - 1278096..1278263 (-) 168 WP_003244944.1 hypothetical protein -
  LRO88_RS06745 spxH 1278578..1279477 (-) 900 WP_003245184.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25762.62 Da        Isoelectric Point: 4.0841

>NTDB_id=635288 LRO88_RS06720 WP_003232942.1 1274031..1274687(+) (mecA) [Bacillus subtilis strain NIB353]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSNLNVNGSKTTLYSFENR
YYLYVDFCNMTDEEVENQLSILLEYANESSISIHRLEEYGKLIISEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=635288 LRO88_RS06720 WP_003232942.1 1274031..1274687(+) (mecA) [Bacillus subtilis strain NIB353]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTACGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTTTTCTGGGAAGTCATGGATGAAGTTCATGAAGAAGAGGAAT
TCGCTGTGGAAGGCCCACTTTGGATTCAAGTTCAGGCACTGGACAAAGGATTAGAAATCATCGTCACAAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCATT
GCTGGATGATTTCCAGAAAGAAGAGCAAGCCGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGATTTG
GCGATTTTGAGGATGTTATTTCTCTATCTAATTTGAACGTTAACGGAAGCAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTAGATTTTTGCAATATGACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGCTGGAGTACGCAAA
TGAATCCTCAATCAGCATACACCGTCTTGAAGAGTACGGCAAGCTGATTATTTCAGAGCATGCTCTAGAAACGATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

99.083

100

0.991