Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   N7980_RS02085 Genome accession   NZ_CP106671
Coordinates   404712..405086 (+) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis strain SRCM116301     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 399712..410086
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N7980_RS02065 (N7980_02065) acdA 400251..401390 (+) 1140 WP_108029079.1 acyl-CoA dehydrogenase AcdA -
  N7980_RS02070 (N7980_02070) rpoE 401573..402094 (+) 522 WP_014665742.1 DNA-directed RNA polymerase subunit delta -
  N7980_RS02075 (N7980_02075) pyrG 402336..403943 (+) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  N7980_RS02080 (N7980_02080) ywjG 404025..404546 (-) 522 WP_041850423.1 DUF2529 domain-containing protein -
  N7980_RS02085 (N7980_02085) letA 404712..405086 (+) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  N7980_RS02090 (N7980_02090) fbaA 405267..406124 (+) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  N7980_RS02095 (N7980_02095) fsa 406244..406882 (+) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  N7980_RS02100 (N7980_02100) murAB 407261..408550 (+) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  N7980_RS02105 (N7980_02105) glpX 408581..409546 (+) 966 WP_003242962.1 class II fructose-bisphosphatase -
  N7980_RS02110 (N7980_02110) - 409761..409922 (+) 162 WP_003227632.1 hypothetical protein -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=635281 N7980_RS02085 WP_003227621.1 404712..405086(+) (letA) [Bacillus subtilis strain SRCM116301]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=635281 N7980_RS02085 WP_003227621.1 404712..405086(+) (letA) [Bacillus subtilis strain SRCM116301]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTTTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAGGAATCGAAGGAATTGGGCGCCCTGACGCACTTTGCAAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363