Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   B591_RS22555 Genome accession   NZ_CP106650
Coordinates   5108490..5110223 (+) Length   577 a.a.
NCBI ID   WP_023419575.1    Uniprot ID   -
Organism   Streptomyces sp. GBA 94-10 4N24 strain GBA 94-10     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 5103490..5115223
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B591_RS22515 (B591_22336) - 5103578..5104411 (-) 834 WP_037788073.1 helix-turn-helix transcriptional regulator -
  B591_RS22520 (B591_22341) - 5104422..5105156 (-) 735 WP_023419571.1 DUF6879 family protein -
  B591_RS22525 (B591_22346) - 5105392..5105829 (+) 438 Protein_4433 site-specific integrase -
  B591_RS22545 (B591_22351) - 5106514..5106813 (+) 300 WP_023419573.1 hypothetical protein -
  B591_RS22550 (B591_22356) - 5106904..5108358 (+) 1455 WP_023419574.1 FGGY-family carbohydrate kinase -
  B591_RS22555 (B591_22361) rcrP 5108490..5110223 (+) 1734 WP_023419575.1 ABC transporter ATP-binding protein Regulator
  B591_RS22560 (B591_22366) rcrQ 5110223..5112139 (+) 1917 WP_023419576.1 ABC transporter ATP-binding protein Regulator
  B591_RS22565 (B591_22371) - 5112233..5112448 (+) 216 WP_037787425.1 hypothetical protein -
  B591_RS22570 (B591_22376) rpoS 5112465..5113538 (-) 1074 WP_023419578.1 RNA polymerase sigma factor Regulator

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 62574.84 Da        Isoelectric Point: 5.4438

>NTDB_id=635255 B591_RS22555 WP_023419575.1 5108490..5110223(+) (rcrP) [Streptomyces sp. GBA 94-10 4N24 strain GBA 94-10]
MLIRLLRTYLRPYQKPIALVMVLQLLQTCAALYLPSLNADIIDRGVVRGDTGVILGLGAVMLAVTLVQMAGNIGAVYFGA
RTAAALGRDVRAAVFDRVQSFSARELNGFGAPSLITRTTNDVQQVQMLALMTFTLMVTAPIMCVGGVIMALGQDVPLSGV
LLAVLPVMAASVGVVVWRLRPLFRSMQKRLDTVNRVLREQITGNRVIRAFVRDRYETERFGRANTDLTEVSLGTGRLLAL
MFPLVMLVVNLSSLAVVWFGAHRIDSGAMEIGSLTAFLAYLMQIVMSVMMATFMFMMVPRAEVCAERIQEVLETSSSVVP
PAAPVRELAGRGTLELRAAGFRYPGAEEWVLRDVELFAGPGETTAVIGSTGSGKTTLLGLAARLIDPVEGEVLVDGVDIR
RIDPALLARTVGLVPQKPYLFSGTVASNLRYGNPEASDEELWHALEVAQAKEFVERLEGGLEAPVSQGGTNVSGGQRQRL
AIARTLVQRPEIYLFDDSFSALDYATDAALRAALRAETAEAGVVIVAQRVSTIRDADRIVVLDEGRVVAVGRHQDLMERD
ETYRELVLSQLTEAEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=635255 B591_RS22555 WP_023419575.1 5108490..5110223(+) (rcrP) [Streptomyces sp. GBA 94-10 4N24 strain GBA 94-10]
GTGCTCATACGACTCCTGCGGACGTATCTGCGTCCGTACCAGAAACCCATCGCGCTGGTGATGGTGCTCCAACTGCTCCA
GACCTGCGCGGCCCTGTACCTTCCGTCGCTCAACGCGGACATCATCGACCGGGGCGTCGTGCGGGGCGACACGGGCGTCA
TCCTCGGGCTCGGTGCCGTCATGCTGGCGGTCACGCTGGTGCAGATGGCGGGCAACATCGGCGCCGTCTACTTCGGCGCC
CGGACCGCCGCCGCCCTCGGCCGGGACGTGCGGGCGGCCGTCTTCGACCGGGTGCAGTCCTTCTCGGCGCGGGAGCTGAA
CGGGTTCGGGGCACCGTCCCTGATCACCCGGACCACCAACGACGTCCAGCAGGTCCAGATGCTGGCCCTGATGACCTTCA
CGCTGATGGTGACGGCCCCCATCATGTGCGTCGGCGGCGTGATCATGGCGCTGGGCCAGGACGTACCGCTCTCCGGGGTG
CTGCTGGCGGTGCTGCCCGTGATGGCGGCCTCGGTCGGCGTGGTCGTCTGGCGGCTGCGGCCGCTCTTCCGCTCCATGCA
GAAGCGGCTGGACACCGTCAACCGGGTGCTGCGGGAGCAGATCACCGGCAACCGCGTCATCCGCGCCTTCGTCCGCGACC
GGTACGAGACCGAGCGGTTCGGCCGCGCCAACACCGACCTGACCGAGGTCTCGCTGGGCACCGGCCGGCTGCTGGCGCTG
ATGTTCCCGCTGGTGATGCTGGTGGTGAACCTGTCCTCGCTGGCCGTGGTCTGGTTCGGTGCCCACCGGATCGACAGCGG
CGCGATGGAGATCGGCTCGCTGACCGCCTTTCTCGCCTACCTGATGCAGATCGTCATGTCCGTGATGATGGCCACCTTCA
TGTTCATGATGGTGCCGCGCGCCGAGGTGTGCGCCGAGCGCATCCAGGAGGTTCTGGAGACGAGCAGCAGTGTCGTCCCG
CCCGCCGCGCCCGTCCGCGAACTGGCCGGCCGGGGCACGCTGGAGCTGCGGGCCGCGGGCTTCCGCTACCCGGGCGCCGA
GGAGTGGGTCCTGCGCGACGTGGAGCTCTTCGCGGGGCCCGGCGAGACCACCGCCGTCATCGGCTCGACCGGCTCCGGCA
AGACCACGCTGCTCGGCCTCGCCGCCCGGCTGATCGACCCCGTCGAGGGCGAGGTGCTGGTCGACGGCGTCGACATCCGC
CGGATCGACCCGGCCCTGCTGGCCCGCACCGTCGGCCTCGTTCCGCAGAAGCCGTACCTCTTCTCCGGCACCGTGGCGAG
CAACCTGCGGTACGGCAACCCGGAGGCGAGCGACGAGGAGCTGTGGCACGCGCTGGAGGTGGCGCAGGCCAAGGAGTTCG
TCGAGCGGCTGGAGGGCGGGCTGGAGGCCCCCGTCTCGCAGGGCGGGACCAACGTCTCGGGCGGTCAGCGGCAGCGGCTC
GCCATCGCCCGCACTCTGGTGCAGCGCCCCGAGATCTACCTCTTCGACGACTCCTTCTCGGCGCTGGACTACGCGACCGA
CGCGGCGCTGCGGGCGGCCCTGCGCGCGGAGACAGCCGAGGCGGGCGTGGTGATCGTCGCCCAGCGGGTGTCGACCATCC
GTGACGCCGACCGGATCGTCGTCCTCGACGAGGGCCGGGTGGTGGCGGTCGGCCGCCACCAGGACCTGATGGAACGGGAC
GAGACCTACCGGGAGCTCGTGCTCTCCCAGCTGACGGAAGCGGAGGCCGCGTGA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(18-288)

ABC transporter (ABC_tran)

(351-498)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

38.112

99.133

0.378