Detailed information NTG0635236

Bioinformatically predicted

Overview

• Name: rpoS
• Type: Regulator
• Locus tag: B591_RS11495
• Genome accession: NZ_CP106650
• Coordinates: 2698753..2699751 (-)
• Length: 332 a.a.
• NCBI ID: WP_023417631.1
• Uniprot ID: -
• Organism: Streptomyces sp. GBA 94-10 4N24 strain GBA 94-10
• Function: regulation of chitinases (predicted from homology) Competence regulation

Genomic Context

Location: 2693753..2704751

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B591_RS11465	-	2694207..2694590 (+)	384	WP_234025349.1	RcpC/CpaB family pilus assembly protein	-
B591_RS11470 (B591_11390)	mscL	2694735..2695262 (+)	528	WP_176572679.1	large conductance mechanosensitive channel protein MscL	-
B591_RS11475 (B591_11395)	-	2695393..2695569 (-)	177	WP_023417628.1	hypothetical protein	-
B591_RS11480	-	2695657..2695935 (+)	279	Protein_2263	low temperature requirement protein A	-
B591_RS11485 (B591_11431)	-	2696109..2697263 (+)	1155	WP_023417629.1	P1 family peptidase	-
B591_RS11490 (B591_11436)	-	2697635..2698387 (+)	753	WP_023417630.1	DUF6227 family protein	-
B591_RS11495 (B591_11441)	rpoS	2698753..2699751 (-)	999	WP_023417631.1	RNA polymerase sigma factor RpoD/SigA	Regulator
B591_RS11500 (B591_11446)	-	2699925..2700518 (+)	594	WP_023421934.1	GNAT family N-acetyltransferase	-
B591_RS11505 (B591_11451)	-	2700515..2701297 (-)	783	WP_023417633.1	dioxygenase	-
B591_RS11510 (B591_11456)	-	2701408..2701926 (+)	519	WP_023417634.1	MarR family winged helix-turn-helix transcriptional regulator	-
B591_RS11515 (B591_11461)	-	2701964..2703529 (-)	1566	WP_023421935.1	MFS transporter	-
B591_RS11520 (B591_11466)	-	2703697..2704344 (-)	648	WP_023421936.1	TetR/AcrR family transcriptional regulator	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 36750.23 Da
• Isoelectric Point: 4.6662

>NTDB_id=635236 B591_RS11495 WP_023417631.1 2698753..2699751(-) (rpoS) [Streptomyces sp. GBA 94-10 4N24 strain GBA 94-10]
MATRAVARRQPAASGETGAAGSVRATGEIADRDLVGMYLDEIARTPLLDAAKEVELSQTIEAGVYAGKILDGEVDSDSAG
ASHEELEALVAEGERAKDVFIRSNLRLVVAVARRYPRSGLPLLDLIQEGNAGLVRAVEKFDYAKGFKFSTYATWWIRQAI
TRSIADQSRTIRLPVHLVEELGRIRRVQREFNRENGRDPEPAEIAAELSSTPERVTDVLDWARDPVSLNMSVDDEGDTQF
GDLLEDTSAISPEQSVLTLLRSEELDDLIGQLDDRTASIIKMRYGIEDGRERTLTEVGKQHGLTRERIRQIEKHALLELK
RMAHDTGFDAAA

Nucleotide

• Length: 999 bp

>NTDB_id=635236 B591_RS11495 WP_023417631.1 2698753..2699751(-) (rpoS) [Streptomyces sp. GBA 94-10 4N24 strain GBA 94-10]
ATGGCAACCCGTGCCGTCGCCCGTCGTCAGCCCGCCGCCTCCGGCGAGACCGGCGCGGCAGGCAGCGTCCGCGCGACCGG
CGAGATCGCCGACCGCGACCTTGTGGGCATGTATCTCGACGAGATCGCCCGCACACCGCTGCTGGACGCCGCGAAGGAAG
TGGAGCTGTCCCAGACCATCGAGGCCGGTGTCTACGCCGGGAAGATCCTCGACGGTGAGGTCGACAGCGACTCCGCCGGA
GCTTCCCACGAAGAGCTGGAAGCCCTCGTCGCCGAGGGGGAGCGGGCCAAGGACGTCTTCATCCGGTCCAACCTCCGCCT
CGTCGTCGCCGTGGCCCGCCGTTACCCACGCAGCGGCCTCCCCCTGCTCGACCTCATCCAGGAGGGGAACGCCGGCCTGG
TCCGCGCCGTCGAGAAGTTCGACTACGCCAAGGGCTTCAAGTTCTCCACGTACGCCACCTGGTGGATCAGGCAGGCCATC
ACCCGCTCCATCGCGGACCAGTCCCGCACCATCCGGCTCCCCGTCCACCTCGTGGAGGAGCTGGGCCGCATCCGCCGCGT
CCAGCGCGAGTTCAACCGCGAGAACGGCCGGGACCCCGAGCCCGCCGAGATCGCGGCCGAGCTGAGCAGCACCCCCGAGC
GCGTCACCGACGTCCTCGACTGGGCCCGCGACCCGGTCTCGCTCAACATGTCGGTGGACGACGAGGGCGACACCCAGTTC
GGCGACCTCCTGGAGGACACCTCCGCGATCTCCCCCGAGCAGTCCGTCCTGACCCTGCTGCGCAGCGAGGAGCTCGACGA
CCTCATCGGCCAGCTCGACGACCGCACCGCCTCCATCATCAAGATGCGGTACGGCATCGAGGACGGCCGTGAGCGCACCC
TCACCGAGGTCGGCAAGCAGCACGGCCTGACCCGCGAGCGCATCCGCCAGATAGAGAAGCACGCGCTCCTGGAGCTCAAG
CGCATGGCGCACGACACCGGATTCGACGCAGCGGCCTGA

Domains

Predicted by InterProScan.

• Sigma-70 region 2 (Sigma70_r2) (100-169)

• Sigma-70 region 3 (Sigma70_r3) (179-255)

• Sigma-70 factor, region 1.2 (Sigma70_r1_2) (33-66)

• Sigma-70, region 4 (Sigma70_r4) (269-320)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoS	Vibrio cholerae O1 biovar El Tor strain E7946	38.486	95.482	0.367