Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   F6Y18_RS06610 Genome accession   NZ_AP020316
Coordinates   1302988..1303662 (-) Length   224 a.a.
NCBI ID   WP_001166500.1    Uniprot ID   Q99VW2
Organism   Staphylococcus aureus strain KUH140331     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1297988..1308662
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F6Y18_RS06595 (KUH140331_1225) vraG 1299171..1301060 (-) 1890 WP_000143627.1 ABC transporter permease VraG -
  F6Y18_RS06600 (KUH140331_1226) vraF 1301050..1301811 (-) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  F6Y18_RS06605 (KUH140331_1227) graS 1301955..1302995 (-) 1041 WP_001061262.1 histidine kinase GraS/ApsS -
  F6Y18_RS06610 (KUH140331_1228) braR 1302988..1303662 (-) 675 WP_001166500.1 response regulator transcription factor GraR/ApsR Regulator
  F6Y18_RS06615 (KUH140331_1229) graX 1303678..1304601 (-) 924 WP_000802955.1 auxiliary protein GraX/ApsX -
  F6Y18_RS06620 (KUH140331_1230) - 1304714..1305220 (+) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  F6Y18_RS06625 (KUH140331_1231) - 1305429..1305857 (-) 429 WP_000198504.1 hypothetical protein -
  F6Y18_RS06630 (KUH140331_1232) - 1306222..1307265 (-) 1044 WP_001030771.1 alpha/beta hydrolase -
  F6Y18_RS06635 (KUH140331_1233) - 1307416..1308483 (-) 1068 WP_000980137.1 membrane protein -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26065.87 Da        Isoelectric Point: 4.3563

>NTDB_id=63511 F6Y18_RS06610 WP_001166500.1 1302988..1303662(-) (braR) [Staphylococcus aureus strain KUH140331]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=63511 F6Y18_RS06610 WP_001166500.1 1302988..1303662(-) (braR) [Staphylococcus aureus strain KUH140331]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCGTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATAAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(149-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q99VW2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397

Multiple sequence alignment