Detailed information NTG0063507

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: F6Y18_RS06125
• Genome accession: NZ_AP020316
• Coordinates: 1207120..1208202 (-)
• Length: 360 a.a.
• NCBI ID: WP_117185658.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain KUH140331
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1202120..1213202

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F6Y18_RS06105	-	1202729..1202833 (-)	105	WP_001790092.1	hypothetical protein	-
F6Y18_RS06110 (KUH140331_1135)	secA	1202875..1205406 (-)	2532	WP_000506408.1	preprotein translocase subunit SecA	-
F6Y18_RS06115 (KUH140331_1136)	hpf	1205820..1206392 (-)	573	WP_000617735.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
F6Y18_RS06120 (KUH140331_1137)	-	1206453..1207127 (-)	675	WP_001057965.1	ComF family protein	-
F6Y18_RS06125 (KUH140331_1138)	comFA	1207120..1208202 (-)	1083	WP_117185658.1	DEAD/DEAH box helicase	Machinery gene
F6Y18_RS06130 (KUH140331_1139)	fakB1	1208566..1209432 (-)	867	WP_000686344.1	fatty acid kinase binding subunit FakB1	-
F6Y18_RS06135 (KUH140331_1140)	-	1209576..1210217 (+)	642	WP_000192947.1	YigZ family protein	-
F6Y18_RS06140 (KUH140331_1141)	-	1210388..1211443 (-)	1056	WP_000258151.1	glycosyltransferase family 4 protein	-
F6Y18_RS06145 (KUH140331_1142)	gdpS	1211761..1212831 (+)	1071	WP_000460983.1	GGDEF domain-containing protein GdpS	-

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 42046.53 Da
• Isoelectric Point: 9.6804

>NTDB_id=63507 F6Y18_RS06125 WP_117185658.1 1207120..1208202(-) (comFA) [Staphylococcus aureus strain KUH140331]
MDNVTRYKITESSQSSSQAYYHLSFEMSEQHSYASEHIVRAIRMRQTILLYAVTGAGKTEMMFQGIQYARRQGDNIAIVS
PRVDVVVEISKRIKDAFLNEDIDILHQQSSQQFEGHFVVCTVHQLYRFKQHFDTIFIDEVDAFPLSMDKSLQQALKSSSK
VEHATIYMTATPPKQLLSEIPHENIIKLPARFHKKSLPVPKYRYFKLNNNKIQKMLYRILQDQINNQRYTLVFFNNIETM
IKTFSVYKQKITKLTYVHSEDVFRFEKVEQLRNGHFDVIFTTTILERGFTMANLDVVVIDAHQYTQEALIQIAGRVGRKL
ECPTGKVLFFHEGVSMNMIQAKKEIQKMNKLALKRGWIDE

Nucleotide

• Length: 1083 bp

>NTDB_id=63507 F6Y18_RS06125 WP_117185658.1 1207120..1208202(-) (comFA) [Staphylococcus aureus strain KUH140331]
ATGGATAATGTAACAAGATATAAAATAACAGAGAGTTCGCAAAGTTCATCACAAGCATATTATCATCTCTCATTTGAAAT
GTCGGAACAGCATTCTTATGCCTCAGAACATATTGTTCGAGCCATTAGAATGAGACAAACGATTTTGTTATATGCCGTAA
CAGGTGCAGGTAAGACAGAAATGATGTTTCAAGGCATTCAATATGCAAGACGACAGGGAGATAATATAGCTATTGTGTCA
CCGCGTGTAGATGTTGTTGTAGAAATTAGTAAACGTATTAAAGACGCATTTCTTAATGAAGATATAGACATACTACACCA
GCAATCAAGTCAACAATTTGAAGGGCATTTTGTTGTATGCACAGTACATCAACTTTACCGATTCAAACAGCACTTTGATA
CTATTTTTATTGATGAAGTCGATGCCTTTCCTTTATCAATGGATAAAAGTTTACAACAAGCATTGAAGTCATCTTCTAAA
GTTGAACATGCAACGATTTATATGACAGCAACACCACCGAAACAACTTCTGTCAGAGATTCCCCACGAAAATATAATTAA
ATTGCCAGCTCGCTTTCATAAAAAATCACTTCCAGTTCCTAAATATCGTTATTTCAAACTTAATAATAATAAGATTCAGA
AAATGTTATACCGAATTTTACAAGATCAAATTAATAATCAACGTTATACACTGGTGTTTTTTAACAATATAGAAACAATG
ATTAAAACATTTTCGGTTTATAAGCAGAAAATTACTAAATTAACATACGTCCATAGCGAGGATGTTTTTCGCTTTGAAAA
AGTTGAACAATTAAGGAATGGACATTTCGATGTCATTTTTACTACGACAATATTAGAACGTGGATTTACAATGGCAAATT
TGGATGTTGTTGTTATCGATGCACATCAATATACTCAAGAGGCTTTAATACAAATTGCTGGACGTGTTGGACGAAAATTA
GAATGTCCTACTGGAAAAGTATTGTTTTTTCATGAAGGAGTAAGTATGAATATGATTCAAGCTAAAAAAGAGATTCAAAA
GATGAACAAATTAGCATTAAAAAGAGGTTGGATTGATGAATAA

Domains

Predicted by InterProScan.

• Type III restriction enzyme, res subunit (ResIII) (31-173)

• Helicase conserved C-terminal domain (Helicase_C) (215-318)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	38.348	94.167	0.361