Detailed information NTG0635069

Bioinformatically predicted

Overview

• Name: fimV
• Type: Machinery gene
• Locus tag: LSP20_RS24615
• Genome accession: NZ_CP089065
• Coordinates: 5305151..5307880 (-)
• Length: 909 a.a.
• NCBI ID: WP_034065640.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain UNC_PaerCF34
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5300151..5312880

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LSP20_RS24590 (LSP20_24600)	-	5300451..5301116 (-)	666	WP_028681105.1	SPOR domain-containing protein	-
LSP20_RS24595 (LSP20_24605)	folC	5301120..5302409 (-)	1290	WP_003104198.1	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	-
LSP20_RS24600 (LSP20_24610)	accD	5302406..5303278 (-)	873	WP_003104199.1	acetyl-CoA carboxylase, carboxyltransferase subunit beta	-
LSP20_RS24605 (LSP20_24615)	-	5303547..5304182 (-)	636	WP_023517821.1	phosphoribosylanthranilate isomerase	-
LSP20_RS24610 (LSP20_24620)	truA	5304272..5305129 (-)	858	WP_003091390.1	tRNA pseudouridine(38-40) synthase TruA	-
LSP20_RS24615 (LSP20_24625)	fimV	5305151..5307880 (-)	2730	WP_034065640.1	motility hub landmark protein FimV	Machinery gene
LSP20_RS24620 (LSP20_24630)	-	5308049..5309059 (-)	1011	WP_003115016.1	aspartate-semialdehyde dehydrogenase	-
LSP20_RS24625 (LSP20_24635)	asd	5309161..5310273 (-)	1113	WP_003111187.1	aspartate-semialdehyde dehydrogenase	-
LSP20_RS24630 (LSP20_24640)	leuB	5310343..5311425 (-)	1083	WP_003091395.1	3-isopropylmalate dehydrogenase	-
LSP20_RS24635 (LSP20_24645)	-	5311484..5312245 (-)	762	WP_003452681.1	class I SAM-dependent methyltransferase	-

Sequence

Protein

• Length: 909 a.a.
• Molecular weight: 96000.09 Da
• Isoelectric Point: 3.9468

>NTDB_id=635069 LSP20_RS24615 WP_034065640.1 5305151..5307880(-) (fimV) [Pseudomonas aeruginosa strain UNC_PaerCF34]
MVRLRTLVRAIAAASVLTSGMAHGLGLGEITLKSALNQPLDAEIELLEVRDLGSGEVIPSLASPEEFSKAGVDRLYYLTD
LKFTPVVKPNGKSVIRVTSSKPVQEPYLNFLVQVLWPNGRLLREYTVLLDPPLYSPQAAASAPQAPVSAPRATGAPRAPQ
APAPVRTTAPAGSDTYRTVSNDTLWEIAQRNRTDRVSVPQAMLAFQELNPGAFVDGNINRLKSGQVLRIPTEQQMLERSP
REALSQVQAQNQSWRGSRNPAAGSAGARQLDATQRNAAGSAPSKVDATDNLRLVSGEGKASKGADKGGKGDSKAIADTLA
VTKESLDSTRRENEELQSRMQDLQSQLDKLQKLIQLKDAQLAKLQGQLGAEGQGAAQPNAALPDASQPNAAAQAPAQPGT
PAPAQPPVAPPPAPAAEKPPAPAVPAPAPVQAAEQPAPSFLDELLANPLWLAVIGGSALLALLVLLMILSRRNAQKEKEE
AQAFAADAGEEQEDALDLGKDGFDDLTLDEPEPQVAAAAPQVEKTTAQTSDALGEADIYIAYGRFNQAAELLQNAIYDEP
QRTDLRLKLMEVYAEMGDREGFARQENELREIGGAQPQVEQLKSRYPAMVAVAAVAGLAGAKLAQDELDSFSLDDLSLDD
SGHAAKPDAAGQDLDDAFDLSLDDLGGGDLGSDDVQADLKSDSGALDDLTLDSDLDLAASTAADKPVDDLDFGLDFAELA
ETPSQPKHDDLGDFSLDLDAPEDKLSDDDFLLSLNDEVPAAAPADNEFTLDTEAAEEPALSLPDDFDLSLADEPTEPAAP
EKGEDSFAAQLDEVSAQLDELASNLDEPKSAAPSFSAEDAAVASALDGDADDDFDFLSGADEAATKLDLARAYIDMGDSE
GARDILDEVLAEGNDSQQAEARELLERLA

Nucleotide

• Length: 2730 bp

>NTDB_id=635069 LSP20_RS24615 WP_034065640.1 5305151..5307880(-) (fimV) [Pseudomonas aeruginosa strain UNC_PaerCF34]
ATGGTTCGGCTTCGTACACTGGTTCGGGCAATCGCGGCGGCCTCGGTCCTGACTTCCGGCATGGCGCATGGATTGGGACT
GGGGGAAATCACCCTGAAGTCGGCGTTGAACCAACCGTTGGATGCCGAGATCGAGCTGCTCGAAGTTCGTGACCTGGGTT
CGGGTGAGGTGATCCCGAGCCTGGCGTCGCCGGAAGAGTTCAGCAAGGCGGGCGTCGATCGCCTGTACTACCTCACCGAC
CTGAAGTTCACGCCGGTGGTGAAGCCCAACGGCAAGAGCGTCATTCGCGTGACCTCGTCGAAGCCGGTGCAGGAGCCCTA
CCTGAACTTCCTGGTCCAGGTGCTCTGGCCGAACGGCCGCCTGCTGCGCGAGTACACCGTCCTGCTGGATCCGCCGCTGT
ACTCCCCGCAGGCCGCGGCAAGCGCTCCGCAAGCGCCGGTCAGCGCGCCGCGCGCGACCGGCGCCCCGCGAGCCCCGCAG
GCTCCGGCTCCGGTGCGTACCACCGCGCCGGCAGGCAGCGACACCTATCGCACCGTTTCCAACGACACGCTCTGGGAGAT
CGCCCAGCGCAACCGTACCGATCGCGTTTCCGTACCCCAGGCGATGCTCGCGTTCCAGGAACTGAATCCGGGCGCCTTCG
TCGATGGCAACATCAACCGGCTGAAGAGCGGCCAGGTCCTGCGCATTCCCACCGAACAGCAGATGCTGGAGCGCTCGCCG
CGCGAGGCGCTGTCCCAGGTGCAGGCGCAGAACCAGAGCTGGCGCGGCAGCCGCAATCCGGCCGCGGGCAGCGCTGGCGC
CAGGCAGTTGGATGCGACCCAGCGCAATGCCGCCGGGTCGGCGCCATCCAAGGTCGACGCCACGGACAACCTGCGCCTGG
TGTCTGGCGAGGGCAAGGCCAGCAAGGGTGCCGACAAGGGCGGGAAGGGCGACAGCAAGGCGATCGCCGATACCCTGGCG
GTGACCAAGGAAAGCCTCGATAGCACTCGCCGCGAGAACGAAGAACTGCAGAGCCGCATGCAGGATCTGCAGAGCCAGTT
GGACAAGCTGCAGAAGTTGATCCAGTTGAAGGACGCCCAGTTGGCCAAGCTGCAAGGGCAGTTGGGCGCCGAAGGCCAGG
GCGCAGCCCAGCCGAACGCAGCCCTGCCGGATGCGTCCCAGCCCAATGCAGCCGCGCAGGCGCCGGCTCAGCCCGGGACT
CCCGCTCCGGCGCAGCCTCCGGTGGCGCCGCCGCCCGCGCCAGCTGCCGAGAAGCCTCCGGCACCTGCCGTTCCGGCGCC
CGCTCCGGTACAGGCGGCAGAACAGCCGGCACCGAGCTTCCTCGACGAACTGCTGGCCAACCCGCTGTGGTTGGCGGTGA
TCGGCGGTAGCGCACTGCTGGCGTTGCTGGTGCTGCTGATGATCCTGTCGCGGCGCAATGCGCAGAAAGAGAAGGAAGAA
GCCCAGGCTTTCGCCGCGGATGCCGGCGAGGAACAGGAGGATGCGCTGGACCTGGGAAAGGACGGCTTCGACGACCTGAC
CCTCGACGAGCCTGAACCGCAGGTCGCAGCCGCTGCGCCGCAGGTCGAGAAGACCACTGCGCAGACTTCCGATGCGCTGG
GCGAGGCCGACATCTATATCGCCTACGGGCGTTTCAACCAGGCCGCCGAACTGTTGCAGAACGCCATCTACGACGAGCCG
CAGCGCACCGACCTGCGCCTCAAGCTGATGGAAGTCTATGCCGAGATGGGCGATCGCGAAGGTTTCGCTCGCCAGGAAAA
CGAGCTGCGCGAAATCGGCGGCGCACAGCCGCAGGTCGAGCAGCTCAAGTCGCGCTACCCGGCAATGGTCGCGGTCGCCG
CGGTTGCCGGCCTGGCCGGCGCCAAGCTGGCGCAGGACGAGCTGGATAGCTTCAGCCTCGACGACCTGTCGCTCGACGAC
AGCGGTCACGCGGCCAAGCCGGATGCGGCAGGACAGGATCTCGACGACGCCTTCGACCTGAGCCTGGACGACCTGGGCGG
CGGCGATCTTGGCAGCGACGACGTGCAGGCCGACCTCAAGTCCGACAGCGGGGCGCTGGACGACCTGACCCTGGACAGCG
ATCTGGACCTGGCGGCCTCGACCGCGGCGGACAAGCCTGTCGACGATCTCGACTTCGGCCTGGATTTCGCGGAGCTGGCA
GAGACTCCGAGCCAACCCAAGCATGACGACCTGGGCGATTTCTCCCTGGATCTCGATGCGCCGGAAGACAAGCTTTCGGA
CGACGACTTCCTGCTTTCGCTGAACGACGAGGTGCCCGCCGCGGCACCCGCCGACAACGAATTCACCCTCGATACCGAGG
CTGCCGAAGAGCCGGCGTTGTCCCTGCCGGACGACTTCGACCTGTCGCTGGCCGACGAGCCGACGGAGCCGGCCGCTCCG
GAGAAGGGCGAGGACAGTTTCGCCGCCCAGTTGGACGAGGTGAGTGCGCAGTTGGACGAGTTGGCCAGCAACCTTGATGA
GCCGAAGAGCGCGGCGCCGAGTTTCTCCGCCGAGGATGCAGCGGTCGCCTCCGCCCTGGACGGAGACGCCGACGATGACT
TCGACTTCCTCTCCGGTGCCGACGAAGCGGCGACCAAGCTGGATCTGGCTCGCGCCTACATCGACATGGGCGATAGCGAA
GGCGCGCGCGATATCCTCGACGAAGTCCTGGCCGAAGGTAACGACAGCCAGCAGGCGGAAGCCCGCGAGTTGCTGGAGCG
CCTGGCCTGA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
fimV	Pseudomonas aeruginosa PAK	97.403	100	0.99