Detailed information NTG0634889

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: N7297_RS06835
• Genome accession: NZ_CP104908
• Coordinates: 1422800..1423918 (-)
• Length: 372 a.a.
• NCBI ID: WP_000347039.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain YZM-0314
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1417800..1428918

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N7297_RS06805 (N7297_06805)	-	1418629..1419477 (+)	849	WP_000336548.1	class II glutamine amidotransferase	-
N7297_RS06810 (N7297_06810)	-	1419730..1420185 (+)	456	WP_000782976.1	bacteriohemerythrin	-
N7297_RS06815 (N7297_06815)	-	1420338..1421405 (+)	1068	WP_002019572.1	hypothetical protein	-
N7297_RS06820 (N7297_06820)	-	1421405..1421728 (+)	324	WP_000442587.1	RnfH family protein	-
N7297_RS06825 (N7297_06825)	-	1421783..1422181 (-)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
N7297_RS06830 (N7297_06830)	fur	1422293..1422730 (+)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
N7297_RS06835 (N7297_06835)	pilU	1422800..1423918 (-)	1119	WP_000347039.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
N7297_RS06840 (N7297_06840)	pilT	1423946..1424983 (-)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
N7297_RS06845 (N7297_06845)	-	1425110..1425802 (+)	693	WP_001108512.1	YggS family pyridoxal phosphate-dependent enzyme	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41933.13 Da
• Isoelectric Point: 6.6944

>NTDB_id=634889 N7297_RS06835 WP_000347039.1 1422800..1423918(-) (pilU) [Acinetobacter baumannii strain YZM-0314]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRREFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=634889 N7297_RS06835 WP_000347039.1 1422800..1423918(-) (pilU) [Acinetobacter baumannii strain YZM-0314]
ATGGATTTTAATGACTTGCTCAACCTGATGGTTGAAAAAAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTGTTACATTCCA
TCATGAGTGAAAAACAACGCAGAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTTGTAGGCGCGACAG
GCACAGGTAAATCTACTTCACTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCTAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterProScan.

• Type II/IV secretion system protein (T2SSE) (31-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.926	100	0.772
pilU	Pseudomonas stutzeri DSM 10701	69.565	98.925	0.688
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.486	93.011	0.395