Detailed information NTG0634800

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: LSO60_RS01305
• Genome accession: NZ_CP089051
• Coordinates: 268488..269639 (-)
• Length: 383 a.a.
• NCBI ID: WP_005001713.1
• Uniprot ID: A0A3F3L989
• Organism: Acinetobacter ursingii strain RIVM_C010559
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 263488..274639

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LSO60_RS01285 (LSO60_01280)	-	264205..265311 (+)	1107	WP_263512742.1	ABC transporter permease	-
LSO60_RS01290 (LSO60_01285)	-	265321..266238 (+)	918	WP_005001710.1	ABC transporter permease	-
LSO60_RS01295 (LSO60_01290)	-	266731..267303 (-)	573	WP_204470139.1	L-threonylcarbamoyladenylate synthase	-
LSO60_RS01300 (LSO60_01295)	dprA	267346..268476 (-)	1131	WP_263512743.1	DNA-processing protein DprA	Machinery gene
LSO60_RS01305 (LSO60_01300)	tsaP	268488..269639 (-)	1152	WP_005001713.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
LSO60_RS01310 (LSO60_01305)	def	269761..270285 (+)	525	WP_262437822.1	peptide deformylase	-
LSO60_RS01315 (LSO60_01310)	-	270371..270802 (+)	432	WP_392389609.1	DUF2946 family protein	-
LSO60_RS01320 (LSO60_01315)	-	270904..272946 (+)	2043	WP_263512744.1	TonB-dependent copper receptor	-
LSO60_RS01325 (LSO60_01320)	-	272990..273247 (+)	258	WP_004985566.1	hypothetical protein	-
LSO60_RS01330 (LSO60_01325)	-	273293..274498 (-)	1206	WP_263512745.1	oxygenase MpaB family protein	-

Sequence

Protein

• Length: 383 a.a.
• Molecular weight: 42196.38 Da
• Isoelectric Point: 9.1290

>NTDB_id=634800 LSO60_RS01305 WP_005001713.1 268488..269639(-) (tsaP) [Acinetobacter ursingii strain RIVM_C010559]
MKKVLHGIRSFNALGLKKHCIAVAICAGLGMTGLSATYAASPNVNPPSLRASAPNVYVVKKGDTLWDISGKFLDKPWRWP
EIWASNKHVKNPHWIYPGDRLLLCTLDGRPLVGRDEGDGCEGIIRRYSGRTTLQPQVRIEQLSNTIPVIPLDNIKQWLDR
TAIVASDSIENTPYILGTADQRVLAGKGQNVYVRGQGLTSGQRYAVYRKGEPYVLTDANGKKHTVGLELLQVASGIVTQV
DHDIATMELTDSYNAEVRRGDLVMFEQEAMLPTLFYPTEANQVTQGGQIVRVMGSIGSAAKNSVVTIDRGRLDGVQSGHV
FAIYQQGETVQDPKTKERIKLPNQKVGTLMVFRTFDQLSYAYVLESSLPIKVGAEILPPRLDD

Nucleotide

• Length: 1152 bp

>NTDB_id=634800 LSO60_RS01305 WP_005001713.1 268488..269639(-) (tsaP) [Acinetobacter ursingii strain RIVM_C010559]
ATGAAAAAGGTTTTGCACGGCATTCGATCATTTAATGCCTTGGGGTTGAAAAAACATTGTATCGCTGTGGCGATTTGCGC
TGGACTCGGGATGACGGGACTCAGTGCAACCTATGCAGCAAGTCCAAACGTGAATCCACCTTCACTCAGAGCAAGCGCAC
CAAATGTTTATGTCGTTAAAAAAGGCGATACATTGTGGGATATTTCAGGAAAATTTCTGGATAAACCTTGGCGCTGGCCT
GAAATCTGGGCAAGCAATAAACACGTTAAGAACCCGCACTGGATTTACCCAGGTGATCGTTTGTTGTTATGTACGCTAGA
TGGACGTCCACTGGTAGGCCGTGACGAAGGTGATGGTTGTGAAGGTATTATCCGTCGTTATTCGGGACGAACCACGCTAC
AGCCTCAAGTTCGTATTGAACAACTCAGCAATACGATTCCTGTGATTCCACTGGACAATATCAAACAATGGTTAGATCGT
ACCGCCATTGTCGCGAGTGATAGTATCGAAAATACGCCTTATATTTTAGGGACAGCAGATCAGCGTGTACTGGCAGGTAA
AGGGCAAAATGTTTACGTACGCGGTCAGGGTCTAACTTCGGGTCAACGCTATGCGGTCTATCGTAAAGGCGAACCTTATG
TGCTGACAGATGCGAATGGCAAAAAACACACCGTGGGCTTGGAATTACTGCAAGTCGCTTCAGGTATTGTGACTCAAGTC
GACCATGATATTGCCACCATGGAACTAACCGATAGCTACAATGCTGAAGTTCGTCGTGGCGATCTGGTCATGTTTGAACA
AGAAGCCATGTTACCAACTTTGTTCTATCCAACAGAAGCCAATCAGGTGACTCAAGGTGGACAGATCGTTCGGGTAATGG
GTTCAATCGGTTCTGCTGCTAAAAATAGTGTAGTCACCATTGATCGTGGTCGTCTGGATGGTGTGCAATCAGGTCATGTT
TTTGCAATTTATCAACAAGGTGAAACGGTTCAGGACCCTAAAACCAAAGAAAGAATCAAATTGCCAAATCAAAAAGTCGG
TACCTTGATGGTATTTAGAACTTTTGACCAACTAAGCTATGCCTATGTGTTAGAGAGTTCTTTACCGATTAAAGTGGGTG
CTGAGATTTTGCCTCCCCGTCTTGACGATTAA

Domains

Predicted by InterproScan.

• LysM domain (LysM) (57-102)

3D structure

• AlphaFold DB: A0A3F3L989

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	70.573	100	0.708