Detailed information NTG0634719

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: LSO59_RS01380
• Genome accession: NZ_CP089038
• Coordinates: 292081..293232 (-)
• Length: 383 a.a.
• NCBI ID: WP_004985575.1
• Uniprot ID: A0A3G9FM33
• Organism: Acinetobacter ursingii strain RIVM_C011601
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 287081..298232

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LSO59_RS01360 (LSO59_01355)	-	287797..288903 (+)	1107	WP_263505634.1	ABC transporter permease	-
LSO59_RS01365 (LSO59_01360)	-	288913..289830 (+)	918	WP_005001710.1	ABC transporter permease	-
LSO59_RS01370 (LSO59_01365)	-	290324..290896 (-)	573	WP_004985579.1	L-threonylcarbamoyladenylate synthase	-
LSO59_RS01375 (LSO59_01370)	dprA	290939..292069 (-)	1131	WP_004985578.1	DNA-processing protein DprA	Machinery gene
LSO59_RS01380 (LSO59_01375)	tsaP	292081..293232 (-)	1152	WP_004985575.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
LSO59_RS01385 (LSO59_01380)	def	293354..293878 (+)	525	WP_004985572.1	peptide deformylase	-
LSO59_RS01390 (LSO59_01385)	-	293964..294395 (+)	432	WP_370685012.1	DUF2946 family protein	-
LSO59_RS01395 (LSO59_01390)	-	294497..296539 (+)	2043	WP_004985567.1	TonB-dependent copper receptor	-
LSO59_RS01400 (LSO59_01395)	-	296583..296840 (+)	258	WP_004985566.1	hypothetical protein	-
LSO59_RS01405 (LSO59_01400)	-	296886..298091 (-)	1206	WP_004985562.1	oxygenase MpaB family protein	-

Sequence

Protein

• Length: 383 a.a.
• Molecular weight: 42210.40 Da
• Isoelectric Point: 9.1290

>NTDB_id=634719 LSO59_RS01380 WP_004985575.1 292081..293232(-) (tsaP) [Acinetobacter ursingii strain RIVM_C011601]
MKKVLHGIRSFNALGLKKHCIAVAICAGLGMTGLSATYAASPNVNPPSLRASAPNVYVVKKGDTLWDISGKFLDKPWRWP
EIWASNKHVKNPHWIYPGDRLLLCTLDGRPLVGRDEGDGCEGIIRRYSGRTTLQPQVRIEQLSNTIPVIPLDNIKQWLDR
TAIVASDSIENTPYILGTADQRVLAGKGQNVYVRGQGLTSGQRYAVYRKGEPYVLTDANGKKHTVGLELLQVASGIVTQV
DHDIATMELTDSYNAEVRRGDLVMFEQEAMLPTLFYPTEANQVTQGGQIIRVMGSIGSAAKNSVVTIDRGRLDGVQSGHV
FAIYQQGETVQDPKTKERIKLPNQKVGTLMVFRTFDQLSYAYVLESSLPIKVGAEILPPRLDD

Nucleotide

• Length: 1152 bp

>NTDB_id=634719 LSO59_RS01380 WP_004985575.1 292081..293232(-) (tsaP) [Acinetobacter ursingii strain RIVM_C011601]
ATGAAAAAGGTTTTGCACGGCATTCGATCATTTAATGCCTTGGGGTTGAAAAAACATTGTATCGCTGTGGCGATTTGCGC
TGGACTCGGGATGACGGGACTCAGTGCAACCTACGCAGCAAGTCCAAACGTGAATCCACCTTCACTCAGAGCAAGCGCAC
CAAATGTTTATGTCGTTAAAAAAGGCGATACATTGTGGGATATTTCAGGAAAATTTCTGGATAAACCTTGGCGCTGGCCT
GAAATCTGGGCAAGCAATAAACACGTTAAGAACCCGCACTGGATTTATCCCGGTGATCGCTTGTTGTTATGTACGCTAGA
TGGACGTCCACTGGTAGGCCGTGACGAAGGTGATGGTTGTGAAGGTATTATCCGTCGTTATTCGGGACGAACCACGCTAC
AGCCTCAAGTTCGTATTGAACAACTCAGTAATACGATTCCTGTGATTCCACTGGACAATATCAAACAATGGTTAGATCGT
ACCGCCATTGTCGCGAGTGACAGTATCGAAAATACACCTTATATTTTAGGGACAGCAGATCAGCGTGTACTGGCAGGTAA
AGGGCAAAATGTTTATGTACGCGGTCAGGGCCTAACTTCGGGTCAACGCTATGCGGTCTATCGTAAAGGCGAACCTTATG
TGCTGACAGATGCAAATGGCAAAAAACACACCGTGGGCTTGGAATTACTGCAAGTCGCTTCAGGTATTGTGACTCAAGTC
GACCATGATATTGCCACCATGGAACTGACCGATAGCTACAATGCTGAAGTTCGTCGTGGTGATCTGGTCATGTTTGAACA
AGAAGCCATGTTACCAACTTTGTTCTATCCAACAGAAGCCAATCAGGTGACTCAAGGTGGACAGATCATTCGGGTAATGG
GTTCAATCGGTTCTGCTGCTAAAAATAGTGTAGTCACCATTGATCGTGGTCGTCTGGATGGTGTGCAATCAGGTCATGTT
TTTGCAATTTATCAACAAGGTGAAACGGTTCAGGACCCTAAAACCAAAGAAAGAATCAAATTACCAAATCAGAAAGTCGG
AACCTTGATGGTATTTAGAACTTTTGACCAACTAAGCTATGCCTATGTGTTAGAAAGTTCCCTACCGATTAAAGTGGGTG
CTGAGATTTTGCCTCCCCGTCTTGACGATTAA

Domains

Predicted by InterproScan.

• LysM domain (LysM) (57-102)

3D structure

• AlphaFold DB: A0A3G9FM33

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	70.833	100	0.71