Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   N8A75_RS17155 Genome accession   NZ_CP104878
Coordinates   3139711..3140571 (-) Length   286 a.a.
NCBI ID   WP_046160795.1    Uniprot ID   -
Organism   Bacillus subtilis strain 4ZT     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3134711..3145571
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N8A75_RS17120 (N8A75_17120) mrpE 3134947..3135423 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  N8A75_RS17125 (N8A75_17125) mrpF 3135423..3135707 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  N8A75_RS17130 (N8A75_17130) mnhG 3135691..3136065 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  N8A75_RS17135 (N8A75_17135) yuxO 3136106..3136486 (-) 381 WP_014477831.1 hotdog fold thioesterase -
  N8A75_RS17140 (N8A75_17140) comA 3136505..3137149 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  N8A75_RS17145 (N8A75_17145) comP 3137230..3139527 (-) 2298 WP_087614687.1 histidine kinase Regulator
  N8A75_RS17150 (N8A75_17150) comX 3139535..3139696 (-) 162 WP_003241045.1 competence pheromone ComX -
  N8A75_RS17155 (N8A75_17155) comQ 3139711..3140571 (-) 861 WP_046160795.1 polyprenyl synthetase family protein Regulator
  N8A75_RS17160 (N8A75_17160) degQ 3140756..3140896 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  N8A75_RS17165 (N8A75_17165) - 3141118..3141243 (+) 126 WP_120028613.1 hypothetical protein -
  N8A75_RS17170 (N8A75_17170) - 3141358..3141726 (+) 369 WP_017695529.1 hypothetical protein -
  N8A75_RS17175 (N8A75_17175) pdeH 3141702..3142931 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  N8A75_RS17180 (N8A75_17180) pncB 3143068..3144540 (-) 1473 WP_129110551.1 nicotinate phosphoribosyltransferase -
  N8A75_RS17185 (N8A75_17185) pncA 3144556..3145107 (-) 552 WP_262091009.1 cysteine hydrolase family protein -

Sequence


Protein


Download         Length: 286 a.a.        Molecular weight: 32511.45 Da        Isoelectric Point: 4.6790

>NTDB_id=634583 N8A75_RS17155 WP_046160795.1 3139711..3140571(-) (comQ) [Bacillus subtilis strain 4ZT]
MKEIVSQKIMNQDLERYLQNFIESKDTFEFADLALHHYLAFNGQDQKAIELLAAGIELLILSFDIYDDLEDQDNGSAVWM
KIDSSIALNAVTALYTLSIQVMCQASHEPEFSQEILNFALQSIQGQHDDIVNVPQTEEACLEMIKNKSGALTALPCVMGV
MLATGKYHPIVASYSYELGIISQIDNDYKGLFYLNNDFVQKKNTLAYLYLKKQFNDASAELLSLYQKPEEFVSINTKALK
RKLTEAGVIQYLLVMKHLSLQKIKNEMSQLKLEEDKTEKLLSVMIK

Nucleotide


Download         Length: 861 bp        

>NTDB_id=634583 N8A75_RS17155 WP_046160795.1 3139711..3140571(-) (comQ) [Bacillus subtilis strain 4ZT]
ATGAAGGAGATTGTAAGCCAAAAAATAATGAATCAGGACTTGGAACGATATCTTCAGAATTTTATTGAGTCTAAGGATAC
GTTTGAGTTTGCCGATTTGGCTCTTCATCATTATTTAGCTTTTAACGGTCAGGACCAAAAAGCAATCGAATTGCTAGCTG
CCGGAATTGAATTGCTTATACTCTCATTCGATATTTATGATGACTTAGAGGATCAAGATAATGGAAGTGCTGTCTGGATG
AAGATTGACTCGTCAATCGCTTTAAATGCAGTTACAGCTCTTTACACCCTAAGTATACAAGTGATGTGTCAAGCTAGTCA
TGAACCAGAATTTTCACAAGAGATATTGAATTTTGCGTTACAATCAATTCAAGGCCAGCATGATGATATTGTGAATGTGC
CGCAAACGGAAGAAGCCTGTCTTGAAATGATCAAAAATAAATCAGGAGCGCTAACGGCATTGCCCTGTGTAATGGGAGTA
ATGCTGGCAACAGGCAAATACCATCCCATTGTAGCTTCATATTCTTATGAACTTGGGATTATTTCACAGATCGATAATGA
TTATAAAGGTTTGTTTTACTTAAATAACGATTTTGTTCAGAAAAAAAATACATTGGCATACTTATACTTAAAGAAACAAT
TTAACGATGCTTCAGCGGAGCTACTAAGTTTATATCAAAAACCAGAGGAATTTGTTTCTATTAATACTAAGGCTTTGAAG
CGAAAATTGACAGAAGCAGGCGTTATACAATATTTACTGGTGATGAAACATTTATCTCTCCAAAAAATAAAGAATGAAAT
GTCACAATTAAAACTAGAAGAAGATAAAACTGAAAAATTATTGTCTGTTATGATTAAATAA

Domains


Predicted by InterProScan.

(39-229)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

44.84

98.252

0.441