Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   N8A75_RS16155 Genome accession   NZ_CP104878
Coordinates   2955014..2955724 (-) Length   236 a.a.
NCBI ID   WP_015251433.1    Uniprot ID   -
Organism   Bacillus subtilis strain 4ZT     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2950014..2960724
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N8A75_RS16135 (N8A75_16135) cysK 2950065..2951000 (+) 936 WP_003229237.1 cysteine synthase A -
  N8A75_RS16140 (N8A75_16140) pepV 2951034..2952425 (-) 1392 WP_004399126.1 dipeptidase PepV -
  N8A75_RS16145 (N8A75_16145) pbuO 2952522..2953820 (+) 1299 WP_003229234.1 hypoxanthine/guanine permease PbuO -
  N8A75_RS16150 (N8A75_16150) ythQ 2953860..2955017 (-) 1158 WP_048655280.1 ABC transporter permease -
  N8A75_RS16155 (N8A75_16155) pptA 2955014..2955724 (-) 711 WP_015251433.1 ABC transporter ATP-binding protein Regulator
  N8A75_RS16160 (N8A75_16160) ytzE 2956014..2956235 (+) 222 WP_003152337.1 DeoR family transcriptional regulator -
  N8A75_RS16165 (N8A75_16165) rsuA 2956357..2957076 (-) 720 WP_048655246.1 pseudouridine synthase -
  N8A75_RS16170 (N8A75_16170) murJ 2957145..2958779 (-) 1635 WP_015251430.1 lipid II flippase MurJ -
  N8A75_RS16175 (N8A75_16175) ytfP 2958982..2960244 (+) 1263 WP_072173641.1 NAD(P)/FAD-dependent oxidoreductase -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 26521.57 Da        Isoelectric Point: 5.0109

>NTDB_id=634579 N8A75_RS16155 WP_015251433.1 2955014..2955724(-) (pptA) [Bacillus subtilis strain 4ZT]
MTNLLEASIEQAGYTSRKKVLTDVFLEVRKGELVGLIGANGAGKSTAIKAILGLSEDFKGHIAWNDCSFAYIPEYPSFYE
ELTLWEHLDLISTLHGIEESEFAHRAQSLLQTFSLDQVKHELPVTFSKGMQQKLMLIQAFLSKPDMYVIDEPFIGLDPIS
TKRFVDMLKAEKERGAGILMCTHVLDTAEKICDRFYMIEKGSLFLQGTLKDIQDKTGLEGQSLLDCFYKAVQGDRP

Nucleotide


Download         Length: 711 bp        

>NTDB_id=634579 N8A75_RS16155 WP_015251433.1 2955014..2955724(-) (pptA) [Bacillus subtilis strain 4ZT]
TTGACAAATTTGCTTGAAGCTTCAATAGAACAGGCCGGGTATACAAGCCGAAAAAAAGTGCTCACCGATGTTTTTCTGGA
AGTCAGAAAAGGGGAACTAGTTGGACTGATCGGAGCTAACGGCGCCGGAAAAAGCACCGCAATCAAGGCGATACTCGGCC
TTTCAGAAGATTTTAAAGGGCATATTGCCTGGAACGACTGTTCATTTGCATATATTCCGGAGTATCCGTCCTTTTACGAA
GAACTGACGCTGTGGGAGCATTTGGATCTGATCAGCACACTCCACGGCATTGAAGAGAGTGAATTTGCGCATCGGGCCCA
AAGCCTGCTGCAGACGTTTTCGCTTGATCAGGTTAAACATGAGCTGCCTGTCACCTTTTCAAAAGGCATGCAGCAAAAAC
TAATGCTTATCCAGGCCTTTCTCTCTAAGCCGGATATGTATGTGATTGATGAACCGTTTATCGGCCTTGATCCGATATCG
ACCAAACGCTTTGTGGACATGCTTAAGGCTGAAAAAGAACGCGGAGCCGGAATTCTTATGTGCACGCATGTACTCGATAC
CGCGGAAAAAATCTGTGACCGGTTTTATATGATTGAGAAAGGTTCATTATTTCTCCAAGGCACGTTAAAAGATATTCAGG
ACAAGACCGGATTAGAGGGGCAGTCATTGCTTGACTGTTTTTATAAGGCAGTTCAAGGTGATCGGCCATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(21-153)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

44.017

99.153

0.436
  pptA Streptococcus thermophilus LMD-9

43.59

99.153

0.432