Detailed information NTG0634563

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: N8A75_RS14195
• Genome accession: NZ_CP104878
• Coordinates: 2586462..2587589 (-)
• Length: 375 a.a.
• NCBI ID: WP_014480328.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain 4ZT
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2581462..2592589

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N8A75_RS14170 (N8A75_14170)	-	2581509..2581721 (-)	213	Protein_2747	recombinase family protein	-
N8A75_RS14175 (N8A75_14175)	fumC	2581940..2583328 (-)	1389	WP_014480325.1	class II fumarate hydratase	-
N8A75_RS14180 (N8A75_14180)	-	2583495..2584385 (+)	891	WP_014480326.1	LysR family transcriptional regulator	-
N8A75_RS14185 (N8A75_14185)	-	2585327..2585722 (+)	396	WP_046160622.1	VOC family protein	-
N8A75_RS14195 (N8A75_14195)	rapC	2586462..2587589 (-)	1128	WP_014480328.1	Rap family tetratricopeptide repeat protein	Regulator
N8A75_RS22115 (N8A75_14200)	-	2587771..2588604 (+)	834	Protein_2752	ribonuclease YeeF family protein	-
N8A75_RS22120 (N8A75_14205)	-	2588990..2589697 (+)	708	WP_014480330.1	hypothetical protein	-
N8A75_RS14210 (N8A75_14210)	-	2589711..2589998 (+)	288	WP_014480331.1	hypothetical protein	-
N8A75_RS14215 (N8A75_14215)	-	2590401..2590841 (+)	441	WP_014480332.1	SMI1/KNR4 family protein	-
N8A75_RS14220 (N8A75_14220)	-	2590940..2591392 (+)	453	WP_014480333.1	SMI1/KNR4 family protein	-
N8A75_RS14225 (N8A75_14225)	cdiI	2591489..2591848 (+)	360	WP_014480334.1	ribonuclease toxin immunity protein CdiI	-
N8A75_RS14230 (N8A75_14230)	-	2591953..2592432 (+)	480	WP_224588637.1	hypothetical protein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 44149.36 Da
• Isoelectric Point: 6.0289

>NTDB_id=634563 N8A75_RS14195 WP_014480328.1 2586462..2587589(-) (rapC) [Bacillus subtilis strain 4ZT]
MNPVLSSSEVGVKINEWYKMIRQFSVPDAEILKAEVEQEIQRMEEDEYLLIYFSLMKFRHQLMLDYLEPVTTRIRPTIEE
LLEKIETSNKGISGLLSYYSLFFRGMYEFDKKQYMKAIYYYREAEKQLIHVPDEIERAEFHFKLAEAYYGMKQSHVSMHH
VKQALDIYNQYELYKVRKVQCMFVISGNYTDFKHYEKSQPHLEKALKLSRELNNKRLISSALYNLGTNFADSGDYEQAEV
YIKQAVEITEKEKLTNLPHSLFSYAKILFKQGKMNEAIQVSKKGLSAALYQGDELFAKLQGYLNALYVDAVDQQGVNKTI
EYLEKNKNYSYIEDIACETAAAYANSKEFETSYVYHQKMLETQTQIQRGECLYDF

Nucleotide

• Length: 1128 bp

>NTDB_id=634563 N8A75_RS14195 WP_014480328.1 2586462..2587589(-) (rapC) [Bacillus subtilis strain 4ZT]
GTGAATCCGGTTTTATCATCGTCAGAAGTTGGCGTAAAGATCAATGAATGGTATAAAATGATACGTCAATTTAGTGTCCC
GGATGCAGAGATTTTAAAGGCAGAGGTCGAGCAAGAAATCCAACGGATGGAGGAAGATGAGTATTTACTCATTTACTTCT
CCTTAATGAAATTCCGTCATCAGCTCATGTTAGATTATTTGGAACCCGTAACGACACGTATAAGACCAACTATTGAGGAA
CTTCTTGAAAAAATTGAGACTTCAAATAAAGGCATATCTGGCCTGTTATCGTATTATTCTCTGTTTTTCAGAGGGATGTA
CGAGTTTGATAAGAAGCAATACATGAAAGCTATCTACTATTATAGAGAAGCCGAAAAGCAGCTTATACATGTCCCTGATG
AGATCGAAAGGGCAGAGTTTCATTTTAAGTTAGCTGAAGCATATTATGGTATGAAGCAAAGTCATGTGTCTATGCATCAC
GTTAAACAAGCGTTGGATATTTATAATCAATATGAACTTTATAAGGTGCGAAAAGTTCAATGTATGTTTGTTATCTCAGG
GAATTATACTGATTTTAAACATTACGAAAAAAGTCAGCCGCATCTTGAAAAGGCATTAAAGTTATCTAGGGAATTGAATA
ACAAAAGGTTGATTAGTTCTGCACTATATAATTTAGGCACTAATTTTGCTGACAGTGGTGATTACGAGCAGGCGGAAGTA
TACATAAAGCAAGCAGTGGAGATTACAGAAAAAGAAAAGCTCACAAACTTGCCACATTCTTTATTTTCTTATGCAAAAAT
CCTTTTTAAACAAGGAAAAATGAATGAGGCTATCCAAGTAAGTAAGAAAGGTTTGTCAGCAGCTCTTTATCAAGGTGATG
AGCTTTTCGCAAAATTACAGGGATATTTAAATGCTCTTTATGTCGATGCAGTGGACCAACAAGGTGTTAATAAAACCATA
GAATACTTAGAAAAAAATAAGAACTATTCATATATTGAAGACATTGCCTGTGAGACCGCAGCTGCTTACGCAAACTCAAA
AGAATTTGAAACATCCTATGTATATCATCAGAAAATGCTTGAGACTCAAACACAAATTCAAAGGGGAGAATGCCTGTATG
ACTTTTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (195-251)

• Tetratricopeptide repeat (TPR_8) (259-287)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	44.415	100	0.445
rapF	Bacillus subtilis subsp. subtilis str. 168	39.418	100	0.397