Detailed information    

insolico Bioinformatically predicted

Overview


Name   recP/tkt   Type   Machinery gene
Locus tag   N8A75_RS10515 Genome accession   NZ_CP104878
Coordinates   1954837..1956840 (+) Length   667 a.a.
NCBI ID   WP_003231593.1    Uniprot ID   -
Organism   Bacillus subtilis strain 4ZT     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1949837..1961840
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N8A75_RS10475 (N8A75_10475) pghL 1950203..1950961 (+) 759 WP_014479934.1 gamma-polyglutamate hydrolase PghL -
  N8A75_RS10480 (N8A75_10480) - 1950988..1951437 (-) 450 WP_014479935.1 YndM family protein -
  N8A75_RS10485 (N8A75_10485) fosM 1951646..1952065 (+) 420 WP_014479937.1 FosM family fosfomycin resistance protein -
  N8A75_RS10490 (N8A75_10490) - 1951989..1952328 (+) 340 Protein_2015 hypothetical protein -
  N8A75_RS10495 (N8A75_10495) dinR/lexA 1952615..1953232 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  N8A75_RS10500 (N8A75_10500) yneA 1953382..1953699 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  N8A75_RS10505 (N8A75_10505) dinL 1953718..1954371 (+) 654 WP_129110507.1 recombinase family protein -
  N8A75_RS10510 (N8A75_10510) ynzC 1954435..1954668 (+) 234 WP_024573193.1 DUF896 domain-containing protein -
  N8A75_RS10515 (N8A75_10515) recP/tkt 1954837..1956840 (+) 2004 WP_003231593.1 transketolase Machinery gene
  N8A75_RS10520 (N8A75_10520) sirA 1956993..1957439 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  N8A75_RS10525 (N8A75_10525) yneF 1957525..1957743 (+) 219 WP_003221221.1 YneF family protein -
  N8A75_RS10530 (N8A75_10530) ynzD 1957817..1957990 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -
  N8A75_RS10535 (N8A75_10535) ccdA 1958210..1958917 (+) 708 WP_003231585.1 cytochrome c-type biogenesis protein CcdA -
  N8A75_RS10540 (N8A75_10540) yneI 1959006..1959368 (+) 363 WP_003245707.1 response regulator -
  N8A75_RS10545 (N8A75_10545) yneJ 1959447..1959938 (+) 492 WP_010886519.1 CcdC family protein -
  N8A75_RS10550 (N8A75_10550) yneK 1959969..1960397 (-) 429 WP_003231580.1 DynA interaction protein YneK -
  N8A75_RS10555 (N8A75_10555) cotM 1960631..1961023 (-) 393 WP_072592538.1 outer spore coat protein CotM -
  N8A75_RS10560 (N8A75_10560) sspP 1961104..1961250 (-) 147 WP_003221237.1 small acid-soluble spore protein P -
  N8A75_RS10565 (N8A75_10565) sspO 1961282..1961428 (-) 147 WP_003244839.1 acid-soluble spore protein SspO -

Sequence


Protein


Download         Length: 667 a.a.        Molecular weight: 72316.39 Da        Isoelectric Point: 4.7291

>NTDB_id=634538 N8A75_RS10515 WP_003231593.1 1954837..1956840(+) (recP/tkt) [Bacillus subtilis strain 4ZT]
MDTIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVSPANPGWFNRDRFVLSAGHGSALLYSMLHLSG
FDLSIEDLKGFRQWGSKTPGHPEFGHTAGVDATTGPLGQGIAMAVGMAIAERHLAETYNRDSFNVVDHYTYSICGDGDLM
EGISSEAASLAGHLQLGRLIVLYDSNDISLDGDLDRSFSENVKQRFEAMNWEVLYVEDGNNIEELTAAIEKARQNEKKPT
LIEVKTTIGFGSPNRAGTSGVHGAPLGKEESKLTKEAYAWTYEEDFYVPSEVYEHFAAAVKESGEKKEQEWNAQFAKYKE
VYPELAEQLELAIKGELPKDWDQEVPVYEKGSSLASRASSGEVLNGLAKKIPFFVGGSADLAGSNKTTIKNAGDFTAVDY
SGKNFWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLAALMGLPVTYVFTHDSIAVGEDGPTHEPVEQLA
SLRAMPNLSLIRPADGNETAAAWKLAVQSTDHPTALVLTRQNLPTIDQTSEEALAGVEKGAYVVSKSKNETPDALLIASG
SEVGLAIEAQAELAKENIDVSVVSMPSMDRFEKQSDEYKNEVLPADVKKRLAIEMGSSFGWGKYTGLEGDVLGIDRFGAS
APGETIINEYGFSVPNVVNRVKALINK

Nucleotide


Download         Length: 2004 bp        

>NTDB_id=634538 N8A75_RS10515 WP_003231593.1 1954837..1956840(+) (recP/tkt) [Bacillus subtilis strain 4ZT]
ATGGATACAATTGAAAAGAAATCAGTTGCTACCATTCGCACACTGTCAATAGACGCTATTGAAAAAGCAAATTCTGGTCA
CCCAGGGATGCCGATGGGAGCCGCTCCAATGGCATACACGCTGTGGACAAAATTTATGAACGTAAGTCCGGCAAACCCTG
GCTGGTTTAACCGTGACCGTTTTGTTTTATCTGCTGGACACGGGTCAGCACTATTATACAGCATGCTTCATTTAAGCGGG
TTTGATCTTAGTATTGAAGATCTTAAGGGATTCCGCCAGTGGGGCAGCAAAACACCTGGACACCCGGAATTCGGACATAC
TGCCGGTGTTGATGCTACAACAGGTCCGCTTGGCCAAGGAATTGCCATGGCAGTCGGTATGGCAATTGCTGAACGCCATT
TAGCGGAAACATACAACCGCGATTCATTTAACGTAGTCGATCATTATACATACAGTATTTGCGGTGATGGTGATTTAATG
GAAGGTATTTCTTCTGAAGCCGCTTCACTCGCAGGCCATCTTCAGCTTGGCCGTCTGATCGTACTATACGATTCTAATGA
CATCTCTCTTGATGGAGACCTCGACCGTTCATTTTCTGAAAACGTGAAACAGCGTTTTGAAGCAATGAATTGGGAAGTTC
TTTATGTTGAGGATGGAAACAATATTGAAGAATTAACAGCGGCTATCGAAAAAGCACGCCAAAATGAAAAGAAACCTACA
TTAATTGAAGTGAAAACGACAATCGGATTCGGTTCACCTAACCGTGCCGGTACATCCGGTGTTCACGGTGCGCCGCTTGG
TAAAGAGGAAAGCAAATTAACAAAAGAAGCTTACGCGTGGACATATGAAGAAGACTTCTACGTTCCGTCAGAAGTTTATG
AGCATTTCGCTGCAGCTGTTAAAGAATCAGGTGAGAAAAAAGAACAAGAATGGAATGCTCAATTCGCTAAGTATAAAGAA
GTTTATCCTGAACTTGCTGAACAGCTTGAACTGGCAATCAAAGGAGAGCTTCCGAAGGACTGGGATCAAGAGGTTCCTGT
GTATGAAAAAGGAAGCAGCCTGGCATCCCGTGCATCTTCCGGTGAAGTTCTCAACGGACTTGCGAAAAAAATTCCTTTCT
TTGTCGGAGGTTCTGCTGACCTAGCGGGATCGAACAAAACGACAATTAAAAATGCCGGTGATTTTACAGCGGTTGATTAC
TCAGGCAAAAACTTCTGGTTTGGTGTACGTGAATTTGCGATGGGTGCAGCCTTAAACGGTATGGCGCTTCATGGCGGTCT
TCGTGTATTCGGCGGAACTTTCTTTGTCTTCTCTGATTACCTGCGTCCTGCGATTCGCCTTGCAGCGTTAATGGGCCTTC
CTGTGACATATGTCTTCACACATGACAGTATTGCGGTTGGTGAAGACGGTCCGACGCACGAGCCTGTTGAACAGCTTGCT
TCACTCCGTGCGATGCCTAACCTTTCTTTGATCCGTCCAGCAGACGGAAATGAGACAGCAGCAGCATGGAAGCTTGCAGT
GCAAAGCACTGACCACCCAACAGCGCTAGTGCTTACACGTCAAAACCTTCCTACCATCGATCAAACATCTGAAGAAGCAT
TGGCAGGAGTAGAAAAAGGTGCATATGTCGTTTCTAAATCTAAAAACGAAACACCTGACGCTCTTCTCATCGCTTCCGGA
TCAGAGGTAGGTCTTGCAATTGAAGCGCAGGCTGAATTGGCAAAAGAAAATATCGATGTTTCTGTTGTCAGCATGCCTTC
AATGGACCGTTTTGAGAAACAATCTGATGAATACAAAAACGAAGTCCTTCCTGCAGATGTGAAAAAACGTCTTGCAATTG
AAATGGGCTCATCATTTGGATGGGGCAAATACACGGGGCTTGAAGGTGACGTTCTCGGCATAGACCGATTCGGTGCATCT
GCTCCAGGTGAAACCATCATTAACGAATACGGCTTCTCAGTTCCGAACGTAGTGAATCGAGTTAAGGCATTAATCAATAA
GTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recP/tkt Streptococcus pneumoniae TIGR4

56.647

99.25

0.562