Detailed information    

insolico Bioinformatically predicted

Overview

Name   rapC   Type   Regulator
Locus tag   N8A75_RS03755 Genome accession   NZ_CP104878
Coordinates   731369..732499 (+) Length   376 a.a.
NCBI ID   WP_021481275.1    Uniprot ID   -
Organism   Bacillus subtilis strain 4ZT     
Function   inhibit the DNA-binding function of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 726369..737499
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N8A75_RS03730 (N8A75_03730) - 726473..726943 (-) 471 WP_262091302.1 TIGR01741 family protein -
  N8A75_RS03735 (N8A75_03735) - 727022..727492 (-) 471 WP_129110464.1 immunity protein YezG family protein -
  N8A75_RS03740 (N8A75_03740) - 727482..727955 (-) 474 WP_129110465.1 antitoxin YezG family protein -
  N8A75_RS03745 (N8A75_03745) yeeF 727961..729970 (-) 2010 WP_129110466.1 LXG family T7SS effector deoxyribonuclease toxin YeeF -
  N8A75_RS03750 (N8A75_03750) - 730183..731206 (+) 1024 Protein_687 hypothetical protein -
  N8A75_RS03755 (N8A75_03755) rapC 731369..732499 (+) 1131 WP_021481275.1 response regulator aspartate phosphatase RapH Regulator
  N8A75_RS03760 (N8A75_03760) phrH 732489..732662 (+) 174 WP_069837348.1 phosphatase RapH inhibitor PhrH -
  N8A75_RS03765 (N8A75_03765) yeeI 732822..733541 (+) 720 WP_003233863.1 YebC/PmpR family DNA-binding transcriptional regulator -
  N8A75_RS03770 (N8A75_03770) - 733675..734103 (+) 429 WP_121548734.1 spore coat protein -
  N8A75_RS03775 (N8A75_03775) yezE 734218..734802 (+) 585 WP_129110467.1 TetR/AcrR family transcriptional regulator -
  N8A75_RS03780 (N8A75_03780) yesE 734881..735324 (+) 444 WP_003233857.1 nuclear transport factor 2 family protein -
  N8A75_RS03785 (N8A75_03785) yesF 735321..736189 (+) 869 Protein_694 NAD-dependent epimerase/dehydratase family protein -
  N8A75_RS03790 (N8A75_03790) cotJA 736315..736563 (+) 249 WP_003219489.1 spore coat-associated protein CotJA -
  N8A75_RS03795 (N8A75_03795) cotJB 736547..736810 (+) 264 WP_003219491.1 spore coat protein CotJB -
  N8A75_RS03800 (N8A75_03800) cotJC 736825..737394 (+) 570 WP_003233850.1 spore coat protein CotJC -

Sequence

Protein


Download         Length: 376 a.a.        Molecular weight: 43992.34 Da        Isoelectric Point: 5.8869

>NTDB_id=634486 N8A75_RS03755 WP_021481275.1 731369..732499(+) (rapC) [Bacillus subtilis strain 4ZT]
MSQAIPSSRVGVKINEWYKMIRQFSVPDAEVLKAEVEQDIQRMEEDQDLLIYYSLMCFRHQLMLDYLEPGQPYGNRPTVT
ELLETIETPQKKLTGLLKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDEIEKAEFHFKVAEAYYHMKQTHVSMH
HILQALDIYQKNPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAV
EHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETVDERKIHDL
LSYFEKKNLHAYIEACARSAAAVFESSCHFEQAAAFYRKVLKAQEDILKGECLYAY

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=634486 N8A75_RS03755 WP_021481275.1 731369..732499(+) (rapC) [Bacillus subtilis strain 4ZT]
TTGAGTCAAGCCATACCGTCTTCGCGTGTAGGTGTTAAGATTAATGAATGGTATAAAATGATTCGCCAGTTCAGTGTTCC
GGATGCTGAGGTTCTGAAAGCGGAGGTGGAGCAGGACATTCAGAGGATGGAAGAGGATCAGGATTTGCTGATCTATTATT
CTCTGATGTGTTTCCGGCACCAGCTGATGCTGGATTATTTGGAGCCGGGACAACCTTACGGGAATCGCCCTACAGTGACA
GAGCTTCTTGAAACGATAGAGACCCCTCAGAAAAAACTCACAGGCCTTTTGAAATACTACTCTTTGTTTTTCCGCGGCAT
GTATGAATTTGATCAAAAAGAATATGTGGAAGCGATCGGGTATTATCGCGAGGCGGAGAAAGAACTGCCGTTTGTGTCAG
ATGAAATTGAGAAAGCGGAATTCCATTTTAAAGTGGCCGAAGCGTATTATCACATGAAGCAAACCCATGTGTCGATGCAT
CATATTCTTCAAGCCTTAGACATTTATCAAAAAAATCCCCTATACAGCATTAGAACGATACAAAGCTTGTTTGTGATCGC
CGGCAACTATGATGATTTCAAACATTATGATAAAGCGCTCCCGCATTTAGAGGCGGCGCTGGAATTGGCAATGGACATTC
AAAATGACAGGTTTATCGCCATTTCTCTATTGAACATCGCGAACAGCTATGACAGATCAGGAGATGATCAGATGGCTGTA
GAACATTTCCAAAAAGCGGCGAAAGTAAGCAGAGAGAAAGTGCCTGATCTGCTTCCGAAAGTCTTGTTTGGATTAAGCTG
GACATTATGTAAAGCGGGCCAAACACAGAAGGCGTTTCAGTTCATAGAGGAAGGATTAGACCATATCACAGCACGTTCTC
ACAAATTTTATAAAGAATTGTTTCTGTTCTTGCAGGCCGTGTACAAGGAGACTGTTGACGAACGAAAAATTCATGATCTT
TTAAGCTATTTCGAAAAAAAGAACCTGCACGCGTACATTGAAGCATGTGCCCGGAGTGCTGCCGCTGTTTTTGAAAGCAG
CTGTCACTTTGAACAAGCTGCTGCGTTTTATCGGAAAGTGCTAAAAGCCCAAGAAGATATTCTAAAAGGAGAGTGTTTAT
ATGCCTATTAA

Domains

Predicted by InterProScan.

response regulator aspartate phosphatase H, N terminal (RapH_N)

(5-65)

Tetratricopeptide repeat (TPR_7)

(222-251)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rapC Bacillus subtilis subsp. subtilis str. 168

40.957

100

0.41
  rapF Bacillus subtilis subsp. subtilis str. 168

39.523

100

0.396