Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | BTOYO_RS13735 | Genome accession | NC_022781 |
| Coordinates | 2662556..2662840 (-) | Length | 94 a.a. |
| NCBI ID | WP_000843036.1 | Uniprot ID | A0A9W5VII1 |
| Organism | Bacillus toyonensis BCT-7112 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2657556..2667840
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BTOYO_RS13700 (Btoyo_2725) | tmk | 2657709..2658335 (+) | 627 | WP_000677211.1 | dTMP kinase | - |
| BTOYO_RS13705 (Btoyo_2726) | holB | 2658371..2659354 (+) | 984 | WP_000754512.1 | DNA polymerase III subunit delta' | - |
| BTOYO_RS13710 (Btoyo_2727) | - | 2659360..2660187 (+) | 828 | WP_000272428.1 | PSP1 domain-containing protein | - |
| BTOYO_RS13715 (Btoyo_2728) | yabA | 2660202..2660552 (+) | 351 | WP_000412058.1 | DNA replication initiation control protein YabA | - |
| BTOYO_RS13720 (Btoyo_2729) | - | 2660674..2661414 (+) | 741 | WP_001055365.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| BTOYO_RS13725 (Btoyo_2730) | - | 2661401..2661691 (+) | 291 | WP_000414346.1 | GIY-YIG nuclease family protein | - |
| BTOYO_RS13730 (Btoyo_2731) | rsmI | 2661660..2662535 (+) | 876 | WP_000267801.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| BTOYO_RS13735 (Btoyo_2732) | abrB | 2662556..2662840 (-) | 285 | WP_000843036.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| BTOYO_RS13740 (Btoyo_2733) | metG | 2663348..2665330 (+) | 1983 | WP_000159673.1 | methionine--tRNA ligase | - |
| BTOYO_RS13745 (Btoyo_2734) | - | 2665499..2666266 (+) | 768 | WP_000895828.1 | TatD family hydrolase | - |
| BTOYO_RS13750 (Btoyo_2735) | rnmV | 2666486..2667043 (+) | 558 | WP_000692838.1 | ribonuclease M5 | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10490.17 Da Isoelectric Point: 4.7174
>NTDB_id=63447 BTOYO_RS13735 WP_000843036.1 2662556..2662840(-) (abrB) [Bacillus toyonensis BCT-7112]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QILNELQDYIETAK
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QILNELQDYIETAK
Nucleotide
Download Length: 285 bp
>NTDB_id=63447 BTOYO_RS13735 WP_000843036.1 2662556..2662840(-) (abrB) [Bacillus toyonensis BCT-7112]
ATGAAATCTACTGGTATTGTTCGTAAAGTTGATGAATTAGGTCGTGTTGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCACTTGAAATCTATGTTGATGACGAAAAAATCATCTTAAAAAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
ATGAAATCTACTGGTATTGTTCGTAAAGTTGATGAATTAGGTCGTGTTGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCACTTGAAATCTATGTTGATGACGAAAAAATCATCTTAAAAAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
85.106 |
100 |
0.851 |