Detailed information NTG0063445

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: BTOYO_RS13540
• Genome accession: NC_022781
• Coordinates: 2625127..2626254 (+)
• Length: 375 a.a.
• NCBI ID: WP_000470741.1
• Uniprot ID: A0A2B5ZTQ8
• Organism: Bacillus toyonensis BCT-7112
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2620127..2631254

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BTOYO_RS13510 (Btoyo_2686)	spoIIIJ	2620167..2620934 (-)	768	WP_000727742.1	YidC family membrane integrase SpoIIIJ	-
BTOYO_RS13515 (Btoyo_2687)	rnpA	2620987..2621334 (-)	348	WP_000728890.1	ribonuclease P protein component	-
BTOYO_RS13520 (Btoyo_2688)	rpmH	2621411..2621545 (-)	135	WP_000831901.1	50S ribosomal protein L34	-
BTOYO_RS13525 (Btoyo_2689)	dnaA	2622110..2623450 (+)	1341	WP_000428014.1	chromosomal replication initiator protein DnaA	-
BTOYO_RS13530 (Btoyo_2690)	dnaN	2623629..2624774 (+)	1146	WP_001212897.1	DNA polymerase III subunit beta	-
BTOYO_RS13535 (Btoyo_2691)	yaaA	2624902..2625114 (+)	213	WP_000821369.1	S4 domain-containing protein YaaA	-
BTOYO_RS13540 (Btoyo_2692)	recF	2625127..2626254 (+)	1128	WP_000470741.1	DNA replication/repair protein RecF	Machinery gene
BTOYO_RS13545 (Btoyo_2693)	gyrB	2626294..2628216 (+)	1923	WP_000435980.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
BTOYO_RS13550 (Btoyo_2694)	gyrA	2628305..2630776 (+)	2472	WP_001282862.1	DNA gyrase subunit A	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 43320.59 Da
• Isoelectric Point: 6.5997

>NTDB_id=63445 BTOYO_RS13540 WP_000470741.1 2625127..2626254(+) (recF) [Bacillus toyonensis BCT-7112]
MFISEIQLKNYRNYEKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEDFGQIKGKLQKRNSS
LSLELNISKKGKKAKLNQLEQQKLSQYIGEMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPVYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGAKILQKRFDFLHLLQEWAAPIHRGISRGLEELEIIYKPSVDVSESMDLSKI
KEVYYESFQSVKQREIFRGTTLIGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLS
ELDDYRQSHLLNTIQGKVQTFVTTTSVDGIEHETLKDAKTIHVTNGTVDCEIDRA

Nucleotide

• Length: 1128 bp

>NTDB_id=63445 BTOYO_RS13540 WP_000470741.1 2625127..2626254(+) (recF) [Bacillus toyonensis BCT-7112]
TTGTTTATTTCAGAAATACAATTAAAAAACTATCGCAATTATGAAAAATTAGAGCTTTCCTTTGAAGATAAAGTGAATGT
AATTATCGGCGAAAATGCGCAAGGGAAAACAAATTTGATGGAAGCTATTTATGTGTTAGCGATGGCGAAATCTCATAGAA
CCTCCAATGACCGCGAGCTTATCCGTTGGGATGAAGATTTCGGTCAAATTAAAGGGAAATTACAAAAGAGAAATAGTTCT
TTGTCTTTAGAATTAAATATTTCGAAAAAAGGTAAAAAGGCAAAATTAAATCAACTTGAACAACAAAAGTTGAGTCAATA
TATTGGCGAAATGAATGTTGTCATGTTTGCCCCAGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTAAGAAGACGCT
TTTTAGATATGGAATTAGGACAAATAGCTCCTGTTTATTTGTATGAATTAAGTCAATATCAAAAAGTGCTCACGCAACGA
AACCACTTGCTAAAAAAAATGCAAGGGAATAGTAAAAATGAGGAAACGATGTTGGATGTATTTACACTGCAACTGATTGA
ACACGGTGCAAAAATATTGCAAAAGCGTTTTGATTTTTTACATTTACTGCAAGAATGGGCAGCCCCAATTCATCGTGGTA
TAAGCCGTGGATTAGAAGAATTAGAAATTATTTATAAACCAAGTGTAGATGTATCAGAATCAATGGATTTGTCGAAAATA
AAAGAAGTATACTATGAAAGTTTTCAATCTGTGAAACAACGTGAAATTTTCCGTGGTACGACTTTAATTGGTCCTCATCG
TGATGATTTACAATTCTTCGTTAATAGTAAAAATGTTCAAGTCTTTGGTTCGCAAGGACAACAACGAACGACTGCACTAT
CCCTAAAATTAGCTGAAATTGAATTGATTTATTCAGAGGTTAAAGAATATCCAATCCTTTTGCTGGATGATGTTTTATCA
GAATTAGACGATTATCGTCAATCACATCTGTTAAATACAATTCAAGGAAAGGTGCAAACATTTGTTACAACGACGAGTGT
CGACGGAATTGAACACGAAACATTGAAAGATGCGAAAACAATTCATGTAACGAACGGCACGGTAGATTGTGAAATAGATA
GGGCATAA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-348)

3D structure

• AlphaFold DB: A0A2B5ZTQ8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	66.576	98.133	0.653