Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | BTOYO_RS07485 | Genome accession | NC_022781 |
| Coordinates | 1454972..1456015 (-) | Length | 347 a.a. |
| NCBI ID | WP_001013172.1 | Uniprot ID | - |
| Organism | Bacillus toyonensis BCT-7112 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1449972..1461015
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BTOYO_RS07440 (Btoyo_1477) | - | 1450397..1450597 (-) | 201 | WP_000106086.1 | YqzE family protein | - |
| BTOYO_RS07445 (Btoyo_1478) | - | 1450636..1451133 (-) | 498 | WP_000836652.1 | shikimate kinase | - |
| BTOYO_RS07450 (Btoyo_1479) | - | 1451254..1451904 (-) | 651 | WP_000183875.1 | 2OG-Fe(II) oxygenase | - |
| BTOYO_RS07455 (Btoyo_1480) | comGG | 1452079..1452450 (-) | 372 | WP_000743702.1 | competence type IV pilus minor pilin ComGG | - |
| BTOYO_RS07460 (Btoyo_1481) | comGF | 1452447..1452920 (-) | 474 | WP_000477944.1 | competence type IV pilus minor pilin ComGF | - |
| BTOYO_RS07465 (Btoyo_1482) | - | 1452890..1453192 (-) | 303 | WP_000829525.1 | hypothetical protein | - |
| BTOYO_RS07470 (Btoyo_1483) | comGD | 1453185..1453640 (-) | 456 | WP_000810404.1 | competence type IV pilus minor pilin ComGD | - |
| BTOYO_RS07475 (Btoyo_1484) | comGC | 1453637..1453936 (-) | 300 | WP_001178691.1 | competence type IV pilus major pilin ComGC | - |
| BTOYO_RS07480 (Btoyo_1485) | comGB | 1453948..1454985 (-) | 1038 | WP_002093281.1 | competence type IV pilus assembly protein ComGB | - |
| BTOYO_RS07485 (Btoyo_1486) | comGA | 1454972..1456015 (-) | 1044 | WP_001013172.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| BTOYO_RS07490 (Btoyo_1487) | - | 1456220..1456915 (+) | 696 | WP_000434112.1 | helix-turn-helix transcriptional regulator | - |
| BTOYO_RS07495 (Btoyo_1488) | - | 1457041..1457283 (+) | 243 | WP_000440717.1 | DUF2626 domain-containing protein | - |
| BTOYO_RS07500 (Btoyo_1489) | - | 1457391..1458785 (+) | 1395 | WP_001094349.1 | L-cystine transporter | - |
| BTOYO_RS07505 (Btoyo_1490) | - | 1458848..1459240 (-) | 393 | WP_000875405.1 | hypothetical protein | - |
| BTOYO_RS07510 (Btoyo_1491) | - | 1459328..1459543 (-) | 216 | WP_001008324.1 | DUF3912 family protein | - |
| BTOYO_RS07515 (Btoyo_1492) | - | 1459796..1460107 (+) | 312 | WP_001092834.1 | hypothetical protein | - |
| BTOYO_RS07520 (Btoyo_1493) | - | 1460143..1460631 (-) | 489 | WP_000764243.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 39204.57 Da Isoelectric Point: 8.5491
>NTDB_id=63430 BTOYO_RS07485 WP_001013172.1 1454972..1456015(-) (comGA) [Bacillus toyonensis BCT-7112]
MNGIEIFANTILKEACRVQASDLHIVPRQKDVAVQLRIGKDLITKQCIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQIDGQEVYLRLSTLPTVYRESLVIRLHLQASVQPLSHLSLFPSTAEKLLSFLRYSHGLLVFTGPTGSGKTTTMYALLEV
IRKRKTRRIVTLEDPVEKRKDDLLQIQINEKAGITYEAGLKAILRHDPDIILVGEIRDEETAKIAVRASLTGHLVMTTLH
TNDAKGAILRFMDYGITRQEIEQALLAVAAQRLVELKCPFCRGKCSILCKSMRQVRQASVYELLDGYDLQQAIKEANGEC
VTYKHETLESSIRKGYALGFLEEDVYV
MNGIEIFANTILKEACRVQASDLHIVPRQKDVAVQLRIGKDLITKQCIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQIDGQEVYLRLSTLPTVYRESLVIRLHLQASVQPLSHLSLFPSTAEKLLSFLRYSHGLLVFTGPTGSGKTTTMYALLEV
IRKRKTRRIVTLEDPVEKRKDDLLQIQINEKAGITYEAGLKAILRHDPDIILVGEIRDEETAKIAVRASLTGHLVMTTLH
TNDAKGAILRFMDYGITRQEIEQALLAVAAQRLVELKCPFCRGKCSILCKSMRQVRQASVYELLDGYDLQQAIKEANGEC
VTYKHETLESSIRKGYALGFLEEDVYV
Nucleotide
Download Length: 1044 bp
>NTDB_id=63430 BTOYO_RS07485 WP_001013172.1 1454972..1456015(-) (comGA) [Bacillus toyonensis BCT-7112]
ATGAATGGAATTGAAATTTTTGCGAATACAATTTTGAAAGAAGCGTGTAGGGTACAAGCATCGGACTTACATATTGTGCC
CCGGCAGAAGGATGTAGCGGTTCAGCTACGTATAGGAAAAGATTTAATTACGAAACAATGTATTGAAAAGGAGTTTGGAG
AAAAACTTGTTTCGCACTTTAAATTTTTGGCATCCATGGATATAGGAGAGAGGCGGAAGCCACAAAATGGTTCATTGTAT
TTACAAATTGATGGACAAGAAGTGTATTTACGTCTTTCAACACTTCCGACTGTATATCGAGAAAGTCTCGTGATTCGCCT
TCATTTACAAGCATCTGTGCAGCCGTTATCTCATCTTTCGTTATTTCCAAGTACGGCGGAAAAACTCCTCTCTTTTTTAC
GTTATTCACATGGTCTACTCGTATTTACTGGACCGACTGGTTCTGGGAAGACAACGACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAGGAAAACACGTCGAATTGTAACACTTGAAGACCCAGTTGAAAAAAGAAAAGACGATTTATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACATATGAGGCTGGACTAAAGGCTATTTTACGCCATGATCCAGATATTATATTAGTTG
GTGAAATCCGGGATGAAGAAACAGCAAAAATAGCTGTAAGAGCAAGTTTAACTGGACATTTAGTAATGACGACCCTGCAT
ACGAATGATGCGAAAGGAGCGATACTCAGATTTATGGATTATGGCATAACGAGGCAAGAAATTGAACAAGCTTTATTGGC
TGTAGCTGCACAGCGACTTGTTGAATTAAAGTGTCCATTTTGCAGAGGAAAGTGCTCAATTTTATGTAAATCAATGCGGC
AAGTAAGACAAGCAAGCGTTTACGAGTTGTTAGATGGATATGATTTGCAACAAGCAATTAAAGAAGCGAACGGAGAATGT
GTTACGTACAAACATGAAACATTAGAATCTTCGATACGAAAAGGGTATGCTTTAGGATTTTTAGAAGAAGATGTTTATGT
TTAA
ATGAATGGAATTGAAATTTTTGCGAATACAATTTTGAAAGAAGCGTGTAGGGTACAAGCATCGGACTTACATATTGTGCC
CCGGCAGAAGGATGTAGCGGTTCAGCTACGTATAGGAAAAGATTTAATTACGAAACAATGTATTGAAAAGGAGTTTGGAG
AAAAACTTGTTTCGCACTTTAAATTTTTGGCATCCATGGATATAGGAGAGAGGCGGAAGCCACAAAATGGTTCATTGTAT
TTACAAATTGATGGACAAGAAGTGTATTTACGTCTTTCAACACTTCCGACTGTATATCGAGAAAGTCTCGTGATTCGCCT
TCATTTACAAGCATCTGTGCAGCCGTTATCTCATCTTTCGTTATTTCCAAGTACGGCGGAAAAACTCCTCTCTTTTTTAC
GTTATTCACATGGTCTACTCGTATTTACTGGACCGACTGGTTCTGGGAAGACAACGACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAGGAAAACACGTCGAATTGTAACACTTGAAGACCCAGTTGAAAAAAGAAAAGACGATTTATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACATATGAGGCTGGACTAAAGGCTATTTTACGCCATGATCCAGATATTATATTAGTTG
GTGAAATCCGGGATGAAGAAACAGCAAAAATAGCTGTAAGAGCAAGTTTAACTGGACATTTAGTAATGACGACCCTGCAT
ACGAATGATGCGAAAGGAGCGATACTCAGATTTATGGATTATGGCATAACGAGGCAAGAAATTGAACAAGCTTTATTGGC
TGTAGCTGCACAGCGACTTGTTGAATTAAAGTGTCCATTTTGCAGAGGAAAGTGCTCAATTTTATGTAAATCAATGCGGC
AAGTAAGACAAGCAAGCGTTTACGAGTTGTTAGATGGATATGATTTGCAACAAGCAATTAAAGAAGCGAACGGAGAATGT
GTTACGTACAAACATGAAACATTAGAATCTTCGATACGAAAAGGGTATGCTTTAGGATTTTTAGAAGAAGATGTTTATGT
TTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
57.637 |
100 |
0.576 |