Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   LSG23_RS05710 Genome accession   NZ_CP088973
Coordinates   1138225..1138881 (+) Length   218 a.a.
NCBI ID   WP_003155032.1    Uniprot ID   I2C3J8
Organism   Bacillus velezensis strain CMML20-16     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1133225..1143881
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LSG23_RS05685 (LSG23_05670) oppF 1133754..1134671 (+) 918 WP_017417453.1 oligopeptide ABC transporter ATP-binding protein OppF -
  LSG23_RS05690 (LSG23_05675) - 1134778..1135965 (+) 1188 WP_077722055.1 putative glycoside hydrolase -
  LSG23_RS05695 (LSG23_05680) - 1136083..1136661 (+) 579 WP_003155035.1 GNAT family N-acetyltransferase -
  LSG23_RS05700 (LSG23_05685) spx 1136840..1137235 (+) 396 WP_003155034.1 transcriptional regulator Spx -
  LSG23_RS05705 (LSG23_05690) - 1137293..1137949 (-) 657 WP_003155033.1 TerC family protein -
  LSG23_RS05710 (LSG23_05700) mecA 1138225..1138881 (+) 657 WP_003155032.1 adaptor protein MecA Regulator
  LSG23_RS05715 (LSG23_05705) - 1139032..1140192 (+) 1161 WP_077722056.1 competence protein CoiA family protein -
  LSG23_RS05720 (LSG23_05710) pepF 1140420..1142249 (+) 1830 WP_003155028.1 oligoendopeptidase F Regulator
  LSG23_RS05725 (LSG23_05715) - 1142287..1142454 (-) 168 WP_003155026.1 hypothetical protein -
  LSG23_RS05730 (LSG23_05720) spxH 1142740..1143642 (-) 903 WP_003155024.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25964.75 Da        Isoelectric Point: 4.1143

>NTDB_id=634289 LSG23_RS05710 WP_003155032.1 1138225..1138881(+) (mecA) [Bacillus velezensis strain CMML20-16]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAESREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAHESSVSIHRLEEYGKLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=634289 LSG23_RS05710 WP_003155032.1 1138225..1138881(+) (mecA) [Bacillus velezensis strain CMML20-16]
ATGGAAATAGAAAGAATTAATGAGCATACTGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAGGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTTT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAGCCGGGAAGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ATGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATTAAAACGACCTTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
CGAATCATCAGTCAGCATTCACCGTCTTGAAGAATACGGCAAATTGGTGATCGCTGATCATGCGTTATATACAATAAAAA
AACACTTTGCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C3J8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

89.45

100

0.895