Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   LRO84_RS03355 Genome accession   NZ_CP088955
Coordinates   690151..694656 (+) Length   1501 a.a.
NCBI ID   WP_231762607.1    Uniprot ID   -
Organism   Acinetobacter calcoaceticus strain ARu19     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 685151..699656
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LRO84_RS03330 (LRO84_03330) - 685589..686227 (-) 639 WP_231762604.1 hypothetical protein -
  LRO84_RS03335 (LRO84_03335) pilG 686513..686896 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  LRO84_RS03340 (LRO84_03340) - 686920..687282 (+) 363 WP_003655288.1 response regulator -
  LRO84_RS03345 (LRO84_03345) - 687342..687878 (+) 537 WP_231762605.1 chemotaxis protein CheW -
  LRO84_RS03350 (LRO84_03350) - 687921..690002 (+) 2082 WP_231762606.1 methyl-accepting chemotaxis protein -
  LRO84_RS03355 (LRO84_03355) chpA 690151..694656 (+) 4506 WP_231762607.1 hybrid sensor histidine kinase/response regulator Regulator
  LRO84_RS03360 (LRO84_03360) - 694656..695123 (+) 468 WP_004639007.1 hypothetical protein -
  LRO84_RS03365 (LRO84_03365) - 695462..696343 (+) 882 WP_231762608.1 alpha/beta fold hydrolase -
  LRO84_RS03370 (LRO84_03370) dapE 696482..697615 (-) 1134 WP_231762609.1 succinyl-diaminopimelate desuccinylase -
  LRO84_RS03375 (LRO84_03375) - 697741..697884 (-) 144 WP_003655297.1 entericidin A/B family lipoprotein -
  LRO84_RS03380 (LRO84_03380) - 698007..698888 (-) 882 WP_231762610.1 DUF1853 family protein -
  LRO84_RS03385 (LRO84_03385) - 698993..699352 (+) 360 WP_231762611.1 YbaN family protein -

Sequence


Protein


Download         Length: 1501 a.a.        Molecular weight: 171476.76 Da        Isoelectric Point: 4.4345

>NTDB_id=634203 LRO84_RS03355 WP_231762607.1 690151..694656(+) (chpA) [Acinetobacter calcoaceticus strain ARu19]
MKEILKTLTEAMMLPEDSYSQQDDEFLDIFVEEIEEIFVELQSLIHEWMQSKNVATLTEIRRHFHTLKGSGRMIAAKSSA
ELAWTVEDTLNRVINESLILTPNIQQYVQLVFKFYFFKLVDDFKSKKEHAVDFRPLILLGQQLQQQQSLEPALEELLLLS
DTLTAETKTGLEVGDLEQESDNLTLETAIESEHNLAETLVLFMEEAEEHLATIDQFLEQEIHQHESYNALIRALHTLRGS
SAMAQVEAIFDASTKVEHLFKILLQEELSSHSEEILLLRDYRQFIRNCLDLLAAHCSNEQLDSNLKQFNQVWDAYMEQHG
EHASPLTPPHGLVSQLLQLDVSELLDAELDFEKGIRSEFPHYLERLSEQADLLLQHTQSQAMVGLYEYTNQLKDSYDVLL
DRPDLLHSDYVFEIYQKAHQQLIQLFDALAAGQRVSIIEQHHNILEELKLYTQYIPSLNSEPLESHQEVVESLFSADVEQ
TANESSASIESILTDHVAMSQSVHLDRQFMSTEHVNRYFDPELLDIFLEEADELLEGMDTDLNIWVNDQENFAALNNLMR
YLHTLKGGANMIQANYIGLIAHELESIYERLIQRQLITSSALIDFIRLVQDDLADRLQIVREQHLDYAASHTIQALKNAG
KVYNSLGSAAKEMQVESETDVILESSVEVLQQEAIHNTALNLDELTSNFEQIVESNNRLVDYTELQVFDAEGYTDSIQDQ
DIDSVVEQTFMEEAAELLEMADHLLKQWFEQRTNRSILLQLQRAVHSLKGGSRMVGLETVQAIAYQLENAFEKFALYHFS
SNIYDNLLESAIVWLKEAIFKQNYQHFDGLQQSLENIQFIETAIQIPSKLTRTDLFSTEPVMSFVQGDGAEPPPMMGAWE
QAQHLEQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLVEMELAIQRLADQLRRMEGELESQIIAKHGIEH
SRYTEFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSEKIRDTESLLVQQSRIQAEIQEGLMRTRLVPFSRLLPRLQR
IVRQTSTALDRPAELFVNNTEGELDRTMLERLVTPLEHMLRNAIDHGLEDRVQREQARKPETGRIELNIHRQGTDVVVTF
KDDGRGIDIEKVRQKALLSGLINPEQVLEHQDILQLIFHPGLSTADQVTQISGRGVGLDVVQSDIKALGGHVSVDSVYGQ
GTIFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPTSLEQYFGSSQEFFEFENKRYPLRYLSEFVGNQPIPRL
SGMMYSLPVLMIKTNNGQTIALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQSTRRHK
QLNEAIYRQRESDERRLIMIVDDSVTVRKVTTRLLERQGYDVVTAKDGIDAIEQLENIKPDLMLLDIEMPRMDGFEVLNL
VRHHDLHQDMPVIMITSRTGEKHRERAFTLGVNQYMGKPFQEEDLLHNIDAFFTTCEEELA

Nucleotide


Download         Length: 4506 bp        

>NTDB_id=634203 LRO84_RS03355 WP_231762607.1 690151..694656(+) (chpA) [Acinetobacter calcoaceticus strain ARu19]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGATGCTACCGGAAGATAGCTATTCTCAACAAGATGATGAATTTCT
TGATATCTTCGTTGAAGAAATTGAAGAAATTTTTGTTGAATTGCAATCTTTGATTCATGAATGGATGCAATCTAAAAATG
TTGCTACGCTGACTGAAATCCGTCGCCATTTTCATACCTTGAAAGGTTCAGGGCGAATGATTGCAGCGAAATCCTCTGCT
GAGCTTGCTTGGACTGTAGAAGATACGCTTAATCGGGTAATCAATGAGAGTCTCATATTAACTCCTAACATCCAACAATA
TGTTCAGTTGGTATTTAAGTTCTATTTCTTTAAATTAGTAGATGACTTTAAATCTAAAAAGGAACATGCAGTAGATTTTA
GGCCTCTTATTTTATTGGGACAACAATTACAACAACAGCAAAGTTTAGAGCCTGCTTTAGAAGAACTTTTATTATTGTCG
GATACTCTCACTGCGGAAACTAAGACTGGTTTAGAGGTGGGTGATTTAGAACAGGAATCAGATAATTTAACTCTAGAAAC
CGCCATAGAAAGTGAACATAACCTTGCTGAAACCTTAGTTTTATTTATGGAAGAAGCGGAAGAGCACTTAGCGACCATCG
ATCAGTTCTTAGAACAAGAAATACATCAGCACGAGAGTTACAATGCATTAATCCGTGCATTACATACGTTGCGCGGCAGC
TCGGCAATGGCTCAGGTAGAAGCAATTTTTGATGCCAGTACCAAGGTTGAACATTTATTCAAAATCTTATTACAAGAAGA
GCTTTCTTCTCATTCAGAAGAAATTTTACTACTCCGTGATTACCGTCAGTTTATTCGAAATTGTTTAGATCTATTGGCTG
CGCATTGCTCTAATGAGCAATTAGACTCTAACCTGAAACAGTTCAATCAGGTTTGGGATGCTTATATGGAACAACATGGG
GAGCATGCGAGCCCGCTCACGCCTCCACATGGTTTAGTATCTCAGTTGTTACAGCTCGATGTTTCAGAATTACTTGATGC
CGAGTTAGATTTTGAAAAAGGAATTCGTTCTGAGTTTCCTCATTATCTTGAACGTTTAAGTGAACAAGCTGATTTGTTAT
TGCAACATACTCAGTCGCAGGCCATGGTTGGTTTATATGAATATACGAACCAGCTGAAAGATAGCTATGATGTATTGCTT
GATCGACCTGATTTATTACACTCAGATTATGTTTTTGAAATTTATCAGAAAGCACATCAACAATTAATTCAGTTATTTGA
TGCATTAGCTGCGGGTCAAAGAGTTAGTATTATTGAGCAACACCACAATATTTTGGAAGAGCTAAAACTATATACCCAAT
ATATTCCAAGCCTTAATTCTGAACCATTAGAAAGTCATCAGGAAGTTGTTGAGTCGCTATTTAGTGCTGATGTAGAACAA
ACAGCAAATGAATCTTCAGCATCTATCGAAAGTATACTAACTGATCATGTAGCAATGAGTCAGAGTGTGCATTTAGATCG
CCAGTTCATGTCTACTGAGCACGTAAACCGTTATTTTGATCCAGAACTGTTAGATATTTTTCTTGAAGAAGCCGATGAGT
TACTTGAAGGAATGGATACAGATCTTAATATTTGGGTTAATGATCAAGAGAACTTTGCTGCTCTTAATAATCTGATGCGC
TATTTGCATACCTTAAAAGGTGGGGCAAATATGATTCAGGCAAATTATATTGGTTTAATTGCGCATGAACTAGAAAGTAT
TTATGAGCGCTTAATTCAAAGACAGTTAATTACTTCATCTGCTCTCATTGATTTTATTCGTCTGGTTCAAGATGATTTAG
CTGATCGCCTACAAATAGTACGTGAACAGCACTTAGATTATGCTGCTTCTCATACTATTCAAGCGCTTAAGAATGCAGGT
AAGGTATATAATTCACTCGGGTCTGCTGCTAAAGAGATGCAAGTAGAGTCTGAAACAGATGTTATACTGGAATCAAGTGT
TGAAGTATTACAACAAGAAGCTATACACAATACTGCGTTAAATCTCGATGAGTTAACTTCTAATTTTGAGCAGATTGTTG
AGTCTAATAATAGACTTGTTGACTACACAGAATTACAAGTTTTTGATGCAGAAGGCTATACAGACAGTATCCAAGATCAG
GATATTGACTCTGTTGTCGAGCAGACATTTATGGAGGAAGCGGCCGAGCTGTTAGAGATGGCCGATCACCTATTAAAGCA
GTGGTTTGAGCAGCGTACCAATCGTAGTATCTTGCTTCAGCTACAAAGAGCAGTACACAGCTTGAAGGGTGGTTCCCGTA
TGGTGGGACTTGAAACCGTACAAGCGATTGCTTATCAACTTGAAAACGCTTTTGAAAAATTTGCGCTTTATCATTTTAGC
TCAAATATTTATGACAACTTGCTAGAGAGTGCAATTGTTTGGTTAAAAGAGGCAATTTTCAAGCAAAATTATCAACATTT
CGATGGTTTACAACAAAGTTTAGAAAATATTCAGTTTATTGAAACTGCAATACAGATTCCAAGTAAGTTGACCAGAACTG
ATCTATTTAGCACTGAACCTGTAATGAGCTTTGTGCAAGGTGATGGTGCAGAACCGCCGCCAATGATGGGGGCATGGGAA
CAAGCACAGCATCTTGAACAAAATAATGAGATGATCCGGGTTTCGGCAGATTTAATTGAGAAAATGATTGATTTGTCTGG
TGAAAATTCGATTAACCGTTCACGAATTGAAATGGATCTCAGTCAATTTGGTCATACGTTAGTGGAAATGGAATTAGCCA
TTCAACGACTAGCAGACCAGTTACGTCGAATGGAAGGCGAATTAGAAAGTCAGATTATTGCAAAACACGGTATTGAGCAC
TCTCGTTATACAGAATTTGATCCTTTAGAGATGGACCAATATTCTTCATTGAATCAATTATCGAAATCACTTGCCGAATC
TGCATCGGATTTAGTGGATTTTAAAAATACATTATCTGAAAAAATCAGAGACACTGAAAGTTTGCTGGTACAGCAGTCAC
GTATTCAGGCCGAAATTCAAGAAGGGCTAATGCGAACACGATTAGTACCATTTTCTCGATTGCTACCTCGTTTACAAAGA
ATTGTGAGGCAGACTTCTACTGCATTGGATCGACCAGCAGAGCTTTTTGTTAATAATACCGAAGGTGAATTAGACCGAAC
AATGCTAGAACGTTTGGTTACACCACTTGAGCACATGCTTCGAAATGCAATCGACCATGGTTTAGAAGATCGTGTGCAAC
GTGAACAAGCGCGAAAACCAGAAACTGGACGTATTGAACTGAATATTCATCGTCAAGGTACGGATGTTGTTGTTACATTT
AAGGATGATGGCCGAGGTATTGATATCGAGAAGGTCCGTCAAAAGGCCCTATTGTCTGGTTTGATTAATCCTGAACAAGT
ATTAGAACATCAAGATATTTTACAGTTGATTTTCCATCCAGGGTTAAGTACGGCCGATCAAGTCACTCAGATCTCAGGTC
GTGGTGTAGGACTAGATGTTGTACAAAGTGATATTAAAGCTTTGGGCGGACATGTGAGTGTGGACTCTGTGTATGGTCAA
GGAACAATCTTTACAATACGCGTTCCAACCACAGTAGCTGTTAGTGATGCCTTAATGGTTAAAGTTGCTGATCAACAATT
TGCAATTCCATTGGCCCAAATTGATCGAATTGTTCGAGTTTCACCAACATCATTAGAACAGTATTTCGGAAGCTCACAAG
AATTCTTTGAATTTGAAAATAAACGCTATCCATTACGTTATTTATCTGAGTTTGTTGGTAATCAACCAATTCCACGTTTA
AGCGGGATGATGTATTCACTACCAGTATTAATGATTAAGACCAATAATGGACAAACAATTGCATTATTGGTTGATCAGCT
TATTGGTTCACGTGCGCAGATTGTGGTCAAGCCAATCGGGCAGCAGTTCTCTAGTATTGGTGCGATTGCAGGCGCAACTA
TTTTAGGTGATGGTCAAGTTTGTCTAATTTTAGATGGACAAAATATTGCTCGCCAAATTCAGTCTACCCGCCGACATAAG
CAGCTTAATGAAGCTATCTATAGACAACGTGAGTCTGATGAACGCCGTCTCATTATGATTGTAGATGACTCTGTCACAGT
CCGTAAGGTAACGACTCGTTTACTCGAACGTCAGGGCTATGACGTAGTAACTGCTAAAGATGGTATTGATGCAATTGAGC
AGTTGGAAAATATTAAACCAGATCTGATGCTGCTTGATATCGAAATGCCGCGAATGGATGGCTTTGAAGTACTTAACCTC
GTGCGACATCATGATCTACATCAAGATATGCCAGTCATTATGATTACATCCAGAACTGGCGAAAAACACCGTGAACGAGC
ATTTACTTTAGGGGTTAACCAATACATGGGTAAACCTTTCCAAGAAGAAGATTTACTTCACAATATTGATGCTTTTTTCA
CGACATGTGAAGAGGAACTTGCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

79.178

100

0.795