Detailed information NTG0634160

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: LRO55_RS10245
• Genome accession: NZ_CP088954
• Coordinates: 2175817..2176632 (-)
• Length: 271 a.a.
• NCBI ID: WP_231763530.1
• Uniprot ID: -
• Organism: Acinetobacter calcoaceticus strain ACa13
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2170817..2181632

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LRO55_RS10215 (LRO55_10215)	-	2171128..2171568 (-)	441	WP_056479630.1	SRPBCC family protein	-
LRO55_RS10220 (LRO55_10220)	tadA	2171639..2172142 (-)	504	WP_004642637.1	tRNA adenosine(34) deaminase TadA	-
LRO55_RS10225 (LRO55_10225)	-	2172148..2173272 (-)	1125	WP_231763526.1	enoyl-CoA hydratase/isomerase family protein	-
LRO55_RS10230 (LRO55_10230)	ung	2173269..2173982 (-)	714	WP_231763527.1	uracil-DNA glycosylase	-
LRO55_RS10235 (LRO55_10235)	-	2174032..2174628 (-)	597	WP_231763528.1	6-pyruvoyl trahydropterin synthase family protein	-
LRO55_RS10240 (LRO55_10240)	gspK	2174858..2175817 (-)	960	WP_231763529.1	type II secretion system minor pseudopilin GspK	-
LRO55_RS10245 (LRO55_10245)	xcpW	2175817..2176632 (-)	816	WP_231763530.1	type II secretion system minor pseudopilin GspJ	Machinery gene
LRO55_RS10250 (LRO55_10250)	xcpV	2176632..2177012 (-)	381	WP_004642631.1	type II secretion system minor pseudopilin GspI	Machinery gene
LRO55_RS10255 (LRO55_10255)	-	2177002..2177556 (-)	555	WP_231763531.1	type II secretion system protein	-
LRO55_RS10260 (LRO55_10260)	-	2177566..2178174 (-)	609	WP_004642629.1	TetR/AcrR family transcriptional regulator	-
LRO55_RS10265 (LRO55_10265)	-	2178211..2178984 (-)	774	WP_231763532.1	TatD family hydrolase	-
LRO55_RS10270 (LRO55_10270)	-	2179003..2179344 (-)	342	WP_231763533.1	PilZ domain-containing protein	-
LRO55_RS10275 (LRO55_10275)	-	2179355..2180335 (-)	981	WP_231763534.1	DNA polymerase III subunit delta'	-
LRO55_RS10280 (LRO55_10280)	kdsB	2180349..2181110 (-)	762	WP_231763535.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30909.34 Da
• Isoelectric Point: 10.2748

>NTDB_id=634160 LRO55_RS10245 WP_231763530.1 2175817..2176632(-) (xcpW) [Acinetobacter calcoaceticus strain ACa13]
MIKNKYFRSRSTASRLAARSEQMMRGYSEQSSSSCAQTKLRFKDSHTRNTVSRLTARSSSARLTRASGFTLVELLVAIAI
FAVLSLLGWKIFDYLLKVRDRNAQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLHSALELDNQVLRFSKAGVTDPLK
QGLSPFERIEYRYDPDQKKLYRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEINIDPTKPEEFRKLPKG
IKIQLTVAGVSYEWIYSLNQGNLSLSKQGGA

Nucleotide

• Length: 816 bp

>NTDB_id=634160 LRO55_RS10245 WP_231763530.1 2175817..2176632(-) (xcpW) [Acinetobacter calcoaceticus strain ACa13]
ATGATAAAAAATAAATATTTTCGCTCTCGAAGCACAGCTTCACGTCTTGCAGCACGATCGGAGCAGATGATGAGGGGTTA
CTCCGAGCAAAGCTCTTCGTCTTGCGCTCAGACAAAGCTTCGCTTTAAAGACTCTCACACTCGAAACACAGTTTCTCGTC
TTACGGCACGATCGAGCAGTGCTCGATTAACTCGTGCCTCAGGATTTACTTTAGTTGAGCTTTTAGTCGCAATTGCAATT
TTTGCTGTTTTATCTTTGTTAGGTTGGAAGATTTTTGATTATTTATTAAAAGTCCGTGATCGTAATGCTCAACATGAAGT
GCAGCTATTTGAATTACAAGATGCATATCAACAAGTTTTGCGAGATACATTACAAATTATACCGTTATCGGCAAATCAAG
GGGGGCAGCTTCATTCAGCATTAGAACTTGATAATCAAGTTCTTCGCTTTAGTAAGGCTGGTGTTACTGATCCTTTAAAA
CAAGGGTTATCACCTTTTGAGCGTATTGAATATCGATATGATCCTGATCAAAAAAAGCTTTATCGTCTTAAATATAGCAA
TTTAAATACTTCAAACAGAGAGCAACCTTTATCTAGCACTTTGTTGAGTCAAGTTGAACAGTTTCAAATTATGGTGCTCA
CACCACAAGAAGTGACAAAGTGGCCAGAAATTAATATTGATCCCACAAAACCAGAAGAGTTTAGAAAACTGCCGAAAGGA
ATAAAAATACAACTCACAGTTGCTGGTGTAAGTTATGAGTGGATTTATAGCTTAAACCAAGGGAATTTATCGCTCTCCAA
ACAAGGAGGAGCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	88.938	83.395	0.742