Detailed information NTG0634071

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: LQF09_RS03880
• Genome accession: NZ_CP088935
• Coordinates: 858127..859311 (+)
• Length: 394 a.a.
• NCBI ID: WP_270069243.1
• Uniprot ID: -
• Organism: Thauera sp. WB-2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 853127..864311

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LQF09_RS03855 (LQF09_03855)	-	853892..854143 (-)	252	WP_002938455.1	YfhL family 4Fe-4S dicluster ferredoxin	-
LQF09_RS03860 (LQF09_03860)	coaD	854163..854651 (-)	489	WP_002931041.1	pantetheine-phosphate adenylyltransferase	-
LQF09_RS03865 (LQF09_03865)	rsmD	854648..855187 (-)	540	WP_002931040.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
LQF09_RS03870 (LQF09_03870)	-	855184..856557 (-)	1374	WP_270069242.1	pitrilysin family protein	-
LQF09_RS03875 (LQF09_03875)	-	856586..857962 (-)	1377	WP_002930446.1	pitrilysin family protein	-
LQF09_RS03880 (LQF09_03880)	pilA	858127..859311 (+)	1185	WP_270069243.1	signal recognition particle-docking protein FtsY	Machinery gene
LQF09_RS03885 (LQF09_03885)	-	859308..860000 (+)	693	WP_002930448.1	ATP-binding cassette domain-containing protein	-
LQF09_RS03890 (LQF09_03890)	ftsX	859997..860893 (+)	897	WP_002938475.1	permease-like cell division protein FtsX	-
LQF09_RS03895 (LQF09_03895)	ahpC	861079..861642 (+)	564	WP_002930451.1	alkyl hydroperoxide reductase subunit C	-
LQF09_RS03900 (LQF09_03900)	ahpF	861773..863332 (+)	1560	WP_270069244.1	alkyl hydroperoxide reductase subunit F	-

Sequence

Protein

• Length: 394 a.a.
• Molecular weight: 41273.59 Da
• Isoelectric Point: 5.8358

>NTDB_id=634071 LQF09_RS03880 WP_270069243.1 858127..859311(+) (pilA) [Thauera sp. WB-2]
MFGFLKKKSPKPEDVAPAVAEPTAEVGVPAPAAIDPAAAAAAVPAVEVAQPAAEAVAEVVPAKGEPAAVAETVVAPAPRL
SWGERLKAGLARTRQQIGGGLANLFGLRKIDEDLLEELESTLLMADCGVDATQYLIDDLRMRWKRDRLETADQLQKALAD
GLHGIIAPLEQALELGSHQPFIIMIAGVNGSGKTTSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLMTWGERNNVTVVA
QEGGDAAAVIFDAINAARARKIDVVLADTAGRLPTQLHLMEEIAKVRRVIAKADPSGPHEVLLVLDANIGQNALAQVKAF
DKAIGVTGLVVTKLDGTAKGGVLAAIARQCPKPLRFIGVGEGIDDLQPFRAREFVDALFEPGAGAVKAGAEARR

Nucleotide

• Length: 1185 bp

>NTDB_id=634071 LQF09_RS03880 WP_270069243.1 858127..859311(+) (pilA) [Thauera sp. WB-2]
ATGTTTGGTTTCCTGAAGAAGAAGTCCCCAAAGCCCGAGGACGTGGCGCCCGCAGTAGCGGAACCGACGGCCGAGGTTGG
CGTTCCCGCGCCTGCGGCGATCGACCCGGCCGCAGCGGCCGCTGCAGTGCCGGCGGTCGAGGTCGCGCAGCCAGCGGCTG
AAGCCGTCGCCGAAGTGGTGCCTGCGAAGGGGGAGCCTGCAGCCGTGGCCGAGACGGTGGTGGCGCCGGCGCCGCGCCTG
TCCTGGGGTGAGCGCCTCAAGGCAGGGCTGGCGCGCACGCGTCAGCAGATCGGCGGTGGCCTGGCCAACCTCTTCGGCCT
GCGCAAGATCGACGAGGATCTGCTCGAGGAACTCGAATCCACCTTGTTGATGGCCGATTGCGGTGTAGATGCCACCCAGT
ACCTCATCGACGACCTGCGCATGCGCTGGAAGCGCGACCGCCTGGAAACCGCCGACCAGCTGCAGAAGGCGCTCGCCGAC
GGCCTGCACGGCATCATTGCGCCGCTCGAGCAGGCGCTTGAGCTTGGCAGCCACCAGCCCTTCATCATCATGATCGCGGG
CGTCAATGGCTCGGGCAAGACGACCTCGATCGGCAAGCTGGCAAAGTATTTCCAGGCCCAGGGCAAGAGTGTGCTGCTGG
CGGCCGGCGATACCTTCCGCGCCGCTGCGCGCGAGCAGCTGATGACCTGGGGTGAGCGCAACAACGTCACCGTGGTCGCC
CAGGAGGGCGGCGATGCCGCAGCGGTCATCTTCGATGCCATCAACGCCGCGCGTGCGCGCAAGATCGACGTCGTGCTCGC
CGACACCGCCGGGCGCCTCCCCACCCAGCTCCACCTGATGGAAGAAATCGCCAAGGTGCGCCGGGTGATCGCCAAGGCCG
ACCCGAGCGGCCCGCATGAGGTGCTGCTGGTGCTCGACGCCAACATCGGCCAGAACGCGCTCGCCCAGGTCAAGGCCTTC
GACAAGGCGATCGGCGTCACCGGCCTGGTGGTGACCAAGCTCGATGGCACCGCCAAGGGCGGTGTGCTGGCGGCGATCGC
GCGCCAATGCCCCAAGCCGCTGCGCTTCATCGGTGTCGGCGAGGGTATCGACGACCTGCAGCCCTTCAGGGCGCGCGAGT
TCGTGGATGCCTTGTTCGAACCTGGTGCAGGTGCGGTAAAGGCGGGAGCGGAAGCGCGCAGATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (97-161)

• SRP54-type protein, GTPase domain (SRP54) (181-379)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	61.652	86.041	0.53