Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   LQF09_RS03455 Genome accession   NZ_CP088935
Coordinates   773038..773427 (-) Length   129 a.a.
NCBI ID   WP_002930412.1    Uniprot ID   A0A350ZXD0
Organism   Thauera sp. WB-2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 768038..778427
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LQF09_RS03440 (LQF09_03440) - 769973..772078 (-) 2106 WP_270069220.1 methyl-accepting chemotaxis protein -
  LQF09_RS03445 (LQF09_03445) - 772133..772639 (-) 507 WP_002930409.1 chemotaxis protein CheW -
  LQF09_RS03450 (LQF09_03450) - 772648..773013 (-) 366 WP_002930411.1 response regulator -
  LQF09_RS03455 (LQF09_03455) pilG 773038..773427 (-) 390 WP_002930412.1 response regulator Regulator
  LQF09_RS03460 (LQF09_03460) - 773480..773659 (-) 180 WP_037982730.1 rubredoxin -
  LQF09_RS03465 (LQF09_03465) - 773805..774632 (+) 828 WP_270069845.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  LQF09_RS03470 (LQF09_03470) thiE 774625..775266 (+) 642 WP_002930415.1 thiamine phosphate synthase -
  LQF09_RS03475 (LQF09_03475) hemL 775372..776655 (+) 1284 WP_002930416.1 glutamate-1-semialdehyde 2,1-aminomutase -

Sequence

Protein


Download         Length: 129 a.a.        Molecular weight: 14084.36 Da        Isoelectric Point: 7.8572

>NTDB_id=634070 LQF09_RS03455 WP_002930412.1 773038..773427(-) (pilG) [Thauera sp. WB-2]
MDIAGLKVMIIDDSNTIRRSAEIFLGQAGCEVLLAEDGFDALAKITDHRPDVIFVDIMMPRLDGYQTCALIKKNARLAST
PVIMLSSKDGLFDRARGRMVGSDEYLTKPFTKDSLLKAVANHAARGGAR

Nucleotide


Download         Length: 390 bp        

>NTDB_id=634070 LQF09_RS03455 WP_002930412.1 773038..773427(-) (pilG) [Thauera sp. WB-2]
ATGGATATTGCCGGCCTGAAGGTCATGATCATCGATGACAGCAACACCATCCGCCGCAGTGCCGAGATCTTTCTCGGCCA
GGCCGGATGCGAGGTACTGCTCGCCGAGGACGGCTTCGACGCCCTGGCGAAGATCACCGACCACCGCCCGGACGTGATCT
TCGTAGACATCATGATGCCCAGGCTGGACGGCTACCAGACCTGCGCCCTGATCAAGAAGAACGCCCGCCTGGCATCGACG
CCGGTGATCATGCTGTCCTCCAAGGACGGTCTGTTCGACCGTGCTCGCGGACGCATGGTCGGCTCCGACGAGTACCTGAC
CAAGCCATTCACCAAGGACAGCCTGCTCAAGGCAGTCGCAAACCACGCGGCGCGCGGCGGCGCGCGCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(8-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A350ZXD0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

68.333

93.023

0.636