Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilH   Type   Machinery gene
Locus tag   PALA4_RS19070 Genome accession   NZ_CP104866
Coordinates   4130756..4131121 (-) Length   121 a.a.
NCBI ID   WP_003084587.1    Uniprot ID   A0A0H2ZKW2
Organism   Pseudomonas aeruginosa strain PALA4     
Function   type IV pilus biogenesis and function (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 4125756..4136121
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PALA4_RS19055 (PALA4_03762) pilK 4127100..4127975 (-) 876 WP_003084594.1 type 4 fimbrial methyltransferase PilK -
  PALA4_RS19060 (PALA4_03763) pilJ 4128036..4130084 (-) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  PALA4_RS19065 (PALA4_03764) - 4130169..4130705 (-) 537 WP_003084590.1 chemotaxis protein CheW -
  PALA4_RS19070 (PALA4_03765) pilH 4130756..4131121 (-) 366 WP_003084587.1 twitching motility response regulator PilH Machinery gene
  PALA4_RS19075 (PALA4_03766) pilG 4131168..4131575 (-) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  PALA4_RS19080 (PALA4_03767) gshB 4131830..4132783 (+) 954 WP_003110019.1 glutathione synthase -
  PALA4_RS19085 (PALA4_03768) - 4132930..4133823 (+) 894 WP_003084580.1 TonB family protein -
  PALA4_RS19090 (PALA4_03769) - 4133872..4134441 (+) 570 WP_003084577.1 YqgE/AlgH family protein -
  PALA4_RS19095 (PALA4_03770) ruvX 4134441..4134875 (+) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  PALA4_RS19100 (PALA4_03771) pyrR 4134987..4135499 (+) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 121 a.a.        Molecular weight: 13273.30 Da        Isoelectric Point: 5.1961

>NTDB_id=633998 PALA4_RS19070 WP_003084587.1 4130756..4131121(-) (pilH) [Pseudomonas aeruginosa strain PALA4]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG

Nucleotide


Download         Length: 366 bp        

>NTDB_id=633998 PALA4_RS19070 WP_003084587.1 4130756..4131121(-) (pilH) [Pseudomonas aeruginosa strain PALA4]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAGTTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZKW2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilH Synechocystis sp. PCC 6803

36.975

98.347

0.364