Detailed information NTG0633786

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: LRX86_RS01805
• Genome accession: NZ_CP088895
• Coordinates: 385794..386852 (+)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain DETAB-R21
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 380794..391852

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LRX86_RS01790 (LRX86_01790)	-	381900..382232 (+)	333	WP_000169602.1	hypothetical protein	-
LRX86_RS01795 (LRX86_01795)	-	382235..383059 (+)	825	WP_096877324.1	putative RNA methyltransferase	-
LRX86_RS01800 (LRX86_01800)	ponA	383077..385632 (-)	2556	WP_000736677.1	penicillin-binding protein PBP1a	-
LRX86_RS01805 (LRX86_01805)	pilM	385794..386852 (+)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
LRX86_RS01810 (LRX86_01810)	pilN	386852..387493 (+)	642	WP_000201228.1	PilN domain-containing protein	Machinery gene
LRX86_RS01815 (LRX86_01815)	pilO	387490..388230 (+)	741	WP_000076106.1	type 4a pilus biogenesis protein PilO	Machinery gene
LRX86_RS01820 (LRX86_01820)	pilP	388241..388768 (+)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
LRX86_RS01825 (LRX86_01825)	pilQ	388831..390996 (+)	2166	WP_001017034.1	type IV pilus secretin PilQ	Machinery gene
LRX86_RS01830 (LRX86_01830)	aroK	391008..391577 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=633786 LRX86_RS01805 WP_002014066.1 385794..386852(+) (pilM) [Acinetobacter baumannii strain DETAB-R21]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=633786 LRX86_RS01805 WP_002014066.1 385794..386852(+) (pilM) [Acinetobacter baumannii strain DETAB-R21]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTCTGCCGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACAACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTCTTTGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGTTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423