Detailed information NTG0633774

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: N6G78_RS08565
• Genome accession: NZ_CP104855
• Coordinates: 1634118..1635107 (+)
• Length: 329 a.a.
• NCBI ID: WP_015383647.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain TY-1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1629118..1640107

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N6G78_RS08550 (N6G78_08550)	acpP	1629315..1629548 (+)	234	WP_003154310.1	acyl carrier protein	-
N6G78_RS08555 (N6G78_08555)	rncS	1629688..1630437 (+)	750	WP_003232030.1	ribonuclease III	-
N6G78_RS08560 (N6G78_08560)	smc	1630538..1634098 (+)	3561	WP_015383646.1	chromosome segregation protein SMC	-
N6G78_RS08565 (N6G78_08565)	pilA	1634118..1635107 (+)	990	WP_015383647.1	signal recognition particle-docking protein FtsY	Machinery gene
N6G78_RS08570 (N6G78_08570)	sivC	1635143..1635628 (-)	486	WP_003245834.1	Ig-like domain-containing protein	-
N6G78_RS08575 (N6G78_08575)	srpM	1635806..1636138 (+)	333	WP_003238590.1	putative DNA-binding protein	-
N6G78_RS08580 (N6G78_08580)	ffh	1636152..1637492 (+)	1341	WP_014113771.1	signal recognition particle protein	-
N6G78_RS08585 (N6G78_08585)	rpsP	1637598..1637870 (+)	273	WP_003220815.1	30S ribosomal protein S16	-
N6G78_RS08590 (N6G78_08590)	khpA	1637870..1638115 (+)	246	WP_014476792.1	KH domain-containing protein	-
N6G78_RS08595 (N6G78_08595)	ylqD	1638237..1638623 (+)	387	WP_015383649.1	YlqD family protein	-
N6G78_RS08600 (N6G78_08600)	rimM	1638628..1639152 (+)	525	WP_003232013.1	ribosome maturation factor RimM	-
N6G78_RS08605 (N6G78_08605)	trmD	1639149..1639880 (+)	732	WP_015383650.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-

Sequence

Protein

• Length: 329 a.a.
• Molecular weight: 36356.55 Da
• Isoelectric Point: 5.0164

>NTDB_id=633774 N6G78_RS08565 WP_015383647.1 1634118..1635107(+) (pilA) [Bacillus subtilis strain TY-1]
MSFFKKLKEKITKQTDSVSEKFKDGLEKTRNSFQNKVNDLVSRYRKVDEDFFEELEEVLISADVGFTTVMELIDELKKEV
KRRNIQDPKEVQSVISEKLVEIYNSGDEQISELNIQDGRLNVILLVGVNGVGKTTTIGKLAHKMKQEGKSVVLAAGDTFR
AGAIEQLEVWGERTGVPVIKQTAGSDPAAVIYDAVHAAKARNADILICDTAGRLQNKVNLMKELEKVKRVIEREVPEAPH
EVLLALDATTGQNAMAQAKEFSKATNVTGIALTKLDGTAKGGIVLAIRNELHIPVKLVGLGEKVDDLQEFDPESYVYGLF
SDLVEKADD

Nucleotide

• Length: 990 bp

>NTDB_id=633774 N6G78_RS08565 WP_015383647.1 1634118..1635107(+) (pilA) [Bacillus subtilis strain TY-1]
ATGAGCTTTTTTAAAAAATTAAAAGAGAAAATCACAAAACAGACAGATTCCGTATCTGAAAAGTTTAAGGATGGCCTTGA
AAAAACAAGAAACTCCTTTCAAAACAAAGTGAATGATCTTGTATCCCGTTACCGTAAAGTGGATGAGGATTTCTTTGAAG
AGCTTGAAGAGGTTCTTATCAGCGCGGATGTCGGTTTTACAACCGTTATGGAATTAATAGATGAGCTGAAAAAAGAAGTC
AAACGCAGAAATATTCAAGATCCAAAGGAAGTCCAGTCAGTGATTTCTGAGAAACTGGTCGAGATTTATAACAGCGGAGA
TGAGCAAATTTCAGAACTGAACATCCAAGATGGGCGTTTAAACGTAATCCTTCTGGTAGGTGTAAACGGCGTCGGGAAAA
CAACAACGATCGGAAAGCTTGCTCATAAAATGAAACAAGAAGGAAAATCTGTCGTACTTGCCGCCGGAGACACTTTTAGA
GCGGGAGCCATTGAACAGCTGGAAGTATGGGGAGAGCGTACAGGAGTGCCTGTCATTAAGCAGACGGCAGGAAGCGATCC
GGCGGCTGTCATCTACGATGCTGTTCATGCTGCGAAAGCAAGAAATGCCGATATATTAATTTGTGATACGGCAGGTCGTC
TCCAAAACAAAGTAAATCTCATGAAAGAGCTTGAAAAAGTAAAACGTGTTATCGAAAGAGAAGTTCCTGAAGCTCCGCAT
GAGGTGCTGCTTGCCCTTGATGCCACGACCGGCCAAAATGCAATGGCTCAGGCAAAAGAGTTCTCTAAAGCAACAAATGT
TACCGGCATTGCTTTAACGAAGCTTGACGGTACGGCAAAGGGCGGTATCGTCCTTGCGATTCGCAACGAGCTTCACATCC
CGGTTAAACTAGTCGGTTTAGGAGAAAAAGTTGATGATCTTCAGGAATTTGATCCAGAATCCTATGTGTACGGACTCTTT
TCAGATTTAGTGGAAAAAGCCGACGATTAA

Domains

Predicted by InterProScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (34-99)

• SRP54-type protein, GTPase domain (SRP54) (121-320)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	44.04	91.793	0.404