Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   N6G78_RS05465 Genome accession   NZ_CP104855
Coordinates   1046926..1047669 (+) Length   247 a.a.
NCBI ID   WP_003233230.1    Uniprot ID   G4NRP4
Organism   Bacillus subtilis strain TY-1     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1041926..1052669
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N6G78_RS05430 (N6G78_05430) yhaI 1042255..1042596 (+) 342 WP_009966921.1 YhaI family protein -
  N6G78_RS05435 (N6G78_05435) scoC 1042593..1043204 (-) 612 WP_003239501.1 HTH-type transcriptional regulator Hpr -
  N6G78_RS05440 (N6G78_05440) yhaH 1043382..1043738 (-) 357 WP_003245875.1 YtxH domain-containing protein -
  N6G78_RS05445 (N6G78_05445) - 1043867..1044058 (+) 192 WP_014476318.1 hypothetical protein -
  N6G78_RS05450 (N6G78_05450) trpP 1044132..1044650 (-) 519 WP_015383243.1 tryptophan transporter TrpP -
  N6G78_RS05455 (N6G78_05455) serC 1044775..1045854 (-) 1080 WP_015383244.1 3-phosphoserine/phosphohydroxythreonine transaminase -
  N6G78_RS05460 (N6G78_05460) hinT 1046001..1046438 (-) 438 WP_003233231.1 HIT family protein -
  N6G78_RS05465 (N6G78_05465) pptA 1046926..1047669 (+) 744 WP_003233230.1 ABC transporter ATP-binding protein EcsA Regulator
  N6G78_RS05470 (N6G78_05470) ecsB 1047662..1048888 (+) 1227 WP_015483030.1 ABC transporter permease EcsB -
  N6G78_RS05475 (N6G78_05475) ecsC 1048908..1049618 (+) 711 WP_015383246.1 EcsC family protein -
  N6G78_RS05480 (N6G78_05480) sndC 1049636..1050826 (-) 1191 WP_015383247.1 N-acetyl amino acid acetylase SndC -
  N6G78_RS05485 (N6G78_05485) - 1050899..1052290 (-) 1392 WP_015383248.1 hypothetical protein -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27722.20 Da        Isoelectric Point: 5.9114

>NTDB_id=633741 N6G78_RS05465 WP_003233230.1 1046926..1047669(+) (pptA) [Bacillus subtilis strain TY-1]
MSLLSVKDLTGGYTRNPVLKNVSFTLEPNQIVGLIGLNGAGKSTTIRHIIGLMDPHKGSIELNGKTFAEDPEGYRSQFTY
IPETPVLYEELTLMEHLELTAMAYGLSKETMEKRLPPLLKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFLAEPALYIIDE
PFLGLDPLAINALLERMNEAKKGGASVLMSTHILATAERYCDSFIILHNGEVRARGTLSELREQFGMKDAALDDLYLELT
KEDAGHE

Nucleotide


Download         Length: 744 bp        

>NTDB_id=633741 N6G78_RS05465 WP_003233230.1 1046926..1047669(+) (pptA) [Bacillus subtilis strain TY-1]
ATGTCTCTGCTATCGGTAAAAGACTTGACCGGCGGATATACAAGGAATCCGGTTTTAAAAAACGTATCATTCACCCTTGA
ACCGAATCAAATTGTCGGCTTAATCGGGCTGAATGGTGCTGGTAAAAGTACAACAATCAGACACATCATCGGGCTGATGG
ACCCGCATAAAGGTTCAATCGAATTAAACGGTAAAACGTTTGCTGAGGATCCGGAAGGCTACCGTTCACAATTTACCTAT
ATACCTGAAACACCTGTTTTATACGAAGAATTGACGCTGATGGAGCATCTTGAACTAACAGCCATGGCATATGGACTGTC
AAAAGAAACGATGGAGAAAAGGCTGCCTCCGCTTTTAAAGGAATTCCGAATGGAAAAGAGGCTGAAGTGGTTCCCGGCCC
ATTTTTCTAAAGGAATGAAGCAGAAGGTTATGATTATGTGCGCATTTTTGGCAGAGCCTGCGCTCTACATTATTGATGAG
CCTTTTCTAGGGCTTGATCCGCTTGCCATTAACGCGCTGCTTGAACGGATGAATGAAGCGAAAAAAGGCGGGGCGAGCGT
GCTGATGTCAACACACATTTTGGCAACGGCAGAACGCTATTGCGATTCGTTTATTATTTTACATAACGGCGAGGTGCGGG
CGCGCGGCACGCTGTCAGAGCTCAGAGAGCAGTTTGGAATGAAGGACGCGGCGCTGGACGATTTGTATCTTGAGCTTACA
AAGGAAGACGCTGGCCATGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-162)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NRP4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

56.904

96.761

0.551
  pptA Streptococcus thermophilus LMD-9

56.485

96.761

0.547